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EMAGE:31341

Slc22a18 ( MGI:1336884)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341
euxassay_019735_01 euxassay_019735_02 euxassay_019735_03 euxassay_019735_04 euxassay_019735_05
EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341
euxassay_019735_06 euxassay_019735_07 euxassay_019735_08 euxassay_019735_09 euxassay_019735_10
EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341
euxassay_019735_11 euxassay_019735_12 euxassay_019735_13 euxassay_019735_14 euxassay_019735_15
EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341
euxassay_019735_16 euxassay_019735_17 euxassay_019735_18 euxassay_019735_19 euxassay_019735_20
EMAGE:31341 EMAGE:31341 EMAGE:31341 EMAGE:31341
euxassay_019735_21 euxassay_019735_22 euxassay_019735_23 euxassay_019735_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
telencephalon
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 09 10 11 12 18 19 20 weak expression: see section 13 17
facial vii ganglion
weak weak
regionalweak expression: see section 06 07 22 23
midbrain
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
vagus x ganglion
moderate moderate
regionalmoderate expression: see section 10 20
diencephalon
moderate moderate
regionalmoderate expression: see section 08 09 10 11 12 13 14 15 16 17 18 19
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 08 09 10 19 20 24 weak expression: see section 05 06 07 11 21 22 23
spinal cord mantle layer
moderate moderate
regionalmoderate expression: see section 11 12 13 14 15 16 17 18
hindbrain
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 09 20 weak expression: see section 21
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56058
Entity Detected:Slc22a18, ( MGI:1336884)
Sequence:sense strand is shown

>T56058
AGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACCTGCTCCTGGTGGCCTCCTGTAGCC
CAGCCCTGCCTGGTGTCTTCCTGCTCTTCGCCTCACGCATACCCTCTGCCCTCATGCACACAATTCCAGC
CGCCCAGATGGTCATCACTGATCTGACAGCGCCCACAGAGCGGCCCGCAGCACTGGGCCGGCTGGGCCTC
TGCTTTGGCATTGGAATTATGTTTGGGTCCCTACTTGGCGGGACCCTCAACACCGCATACGGGATCCAGT
GTCCTGCCATCCTGGCTTTTGTGGTCACCCTCCTAGGAGCTGTCCTCAGCTTTACCTGTGTCCCTGCTAC
CACCAAGGAGGCCAGTGTCCAGTCAGCTCCTCAGGGTGGAACCAAGGCCAGTGTATTTGACCTGAAGGCC
ATCACCCGCCTGCTACTGCTGCCTAGAGTGCTGCCTGTATTCCTGTCAGTATTTTCCGGCCTCCCTTCAG
GACTCTTCTTGGTGATGTTTTCCATCATCTCTATGGACTTCTTCCAGCTGGAGGCTGCACAGGCTGGCTA
CCTCATGTCCTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCAT
TTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTTGCTGTTGTGGGACTGGGCATGGCGCTGA
TGTCCAGTGTGCTCCATTTCTGTTTTCTGATGCCTGGGCTGGTATTCAGTCTCTGTACTCTCAACGTAGT
CACAGACAGCATGCTGACCAAGGCTGTGTCCGCTTCAGACACAGGGACCATGCTGGGCCTCTCTGCATCT
GTGCAACCATTGACCCGAACTCTAGGACCCACCCTAGGTGGCCTGCTGTACCGTAGCTATGGTGTCCCCA
TCTTTGGCCATGTGCAGCTCATGGTGAACTTGCTTGTCCTATTGGTCCTTTGGAAGAAGCCATTGTCCCA
GAAGGGAGAA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019735 same experiment
 EMAGE:31343 same embryo
 EMAGE:13495 same embryo
 EMAGE:13496 same embryo
 EMAGE:13497 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS