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EMAGE:31390

Slc5a7 solute carrier family 5 (choline transporter), member 7 ( MGI:1927126)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390
euxassay_019718_01 euxassay_019718_02 euxassay_019718_03 euxassay_019718_04 euxassay_019718_05
EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390
euxassay_019718_06 euxassay_019718_07 euxassay_019718_08 euxassay_019718_09 euxassay_019718_10
EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390
euxassay_019718_11 euxassay_019718_12 euxassay_019718_13 euxassay_019718_14 euxassay_019718_15
EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390 EMAGE:31390
euxassay_019718_16 euxassay_019718_17 euxassay_019718_18 euxassay_019718_19 euxassay_019718_20
EMAGE:31390
euxassay_019718_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
medulla oblongata basal plate mantle layer
moderate moderate
regionalmoderate expression: see section 09 15
midbrain mantle layer
moderate moderate
regionalmoderate expression: see section 13 weak expression: see section 10 11 12
ventral grey horn
strong strong
regionalstrong expression: see section 14 15 moderate expression: see section 09 10 11 12 13
pons mantle layer
moderate moderate
regionalmoderate expression: see section 07 17 weak expression: see section 08 16
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56039
Entity Detected:Slc5a7, solute carrier family 5 (choline transporter), member 7 ( MGI:1927126)
Sequence:sense strand is shown

>T56039
AAAAGGTGGAAGTCCTTTGCTTAAAAATGTGACTTAAAAATTCCTAGTATGACTTTTAAAATTTAAAGTT
AAATAATTTTACATATTGTAATATCCTACTTTTCAGTGGTGTCTCAATTCGTAGGCCTCTTTACTGTATG
TATATTACATAAGAAAGATAATTAATTTACCCTCCAGTCTATCTCAGAATCAACTCACTAACTATGGACT
ATTTGAAAGTATGGAGTCTGAGATGCTCAAATGTGGGGTGAGAAAAGAATCAAAGAAAAAAGAAAACACA
GATTAAAAAATAGAAAACTTTGGGCATGAAAAACTACTAGTGACAAGGATGAAATTTCTGGTAAACATGG
TATTTCAGACCCACAAGGTCTTTCAACAAAGACAAAAGAGTGAATTTTGCCCAACTCATCATCTGTGCCC
TTCCATCGGATTGTTAATGTGCGTTCTTGAATTATGAACATCATGGAGTCTCATTCATACTGTAGACCTT
ACAGCAAAGCAGGTTCTTTCCATATACAATATATTTTGTAATGTTCTTAGTGAACAACTGCCCAACTAAT
CTTATAATATTTAAAGTGTTAAAATAGCAAAAAAGAAAATGAGAGAAGAATCCTAAAGTATTTATTTATG
CATACTCTGGAATGAATTCCTCATGAATTTCAAGCAAGGGATGATGCTTCAAAGTACGGAAGGTCTACTC
TGTATCAGAATGGTGACATCTCTAAGTCATTCCAGATTCAGGCAGTAGACGTCATTTTCAAATCCCCAAT
GAAATTAAAATAACACAACTGTTTCAGCCTCTTGCCTGGGAAGTAATATGTGTAGCATTGGAACAAGATA
GGAGTTTCCCTCCCATATATTACCAATGATTGTACTATGTTTCTTAGGTAAGTTGTGTTCCTCTCCACAT
ATTCAGAACATCAAGCTTGTAGGTGAAATGATATGTCAACAAGCTATCAGATGCTCAGTGCCAAAATCCA
AT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019718 same experiment
 EMAGE:10020 same embryo
 EMAGE:31543 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS