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EMAGE:3272

Shh sonic hedgehog ( MGI:98297)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3272 EMAGE:3272
Fig 9A Beverdam et al, 2001 [PMID:11641221] .Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright. Fig 9A Beverdam et al, 2001 [PMID:11641221] .Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
This data has been mapped onto two virtual section planes in this EMAGE entry. Image annotation: arrow = Shh expression in ectoderm of the medial nasal process.
Expression Pattern Description
Spatial Annotation:
EMAGE:3272EMAGE:3272EMAGE:3272Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3272_voxel_notDetected_3D_1.wlz
3272_voxel_strong_3D_1.wlz
3272_voxel_notDetected_3D_2.wlz
3272_voxel_strong_3D_2.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3272_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
medial-nasal process ectoderm
detected detected
regionalExpression in a region of the ectoderm covering the medial nasal processes
Annotation Validation: Submitter + EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2152044
Entity Detected:Shh, sonic hedgehog ( MGI:98297)
Notes:The Shh probe used in this study by Beverdam et al, 2001 [PMID:11641221] was a gift from C. Tabin (Boston) and is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:undefined radioactivity
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:undefined
General Information
Authors:Beverdam A; Brouwer A; Reijnen M; Korving J; Meijlink F. 2001 [PMID:11641221] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11641221] Beverdam A, Brouwer A, Reijnen M, Korving J, Meijlink F 2001 Severe nasal clefting and abnormal embryonic apoptosis in Alx3/Alx4 double mutant mice. Development (128):3975-86
Links:MGI:2152082 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI