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EMAGE:7066

Rnf183 ring finger protein 183 ( MGI:1923322)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7066
euxassay_002501_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7066Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7066_wholemount_moderate.wlz
7066_wholemount_weak.wlz
7066_wholemount_possible.wlz
7066_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7066_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5027
Entity Detected:Rnf183, ring finger protein 183 ( MGI:1923322)
Sequence:sense strand is shown

>T5027
CCACGCGTCCGCTGGCTGAAGCTGCCTATGAATGTCATGAGAGAAAAGAGAAGGTCAATTTTATTCCCCT
CTATCTTTCAGTACCTGGTACAGCACCTGGCATGTGGGCATCCTCTGGAGGTTCCGGCTCCCTGTATGTG
ATCAGAGGATGAGCGAACCACAGGGCCAGGAGCTCAGAGCCGAGTGCCCTGTCTGCTGGAACCCTTTCAA
CAACACATTCCACACCCCCAAAGTGCTAGACTGCTGTCACTCCTTCTGTGTGGAATGCCTGGCCCACCTC
AGCCTGGTAACCCCAGCCAGGCGCCGCTTGCTCTGCCCACTCTGTCGTCAGCCCACCGTGCTGGCTTCAG
GGCAGCCAGTCACTGACTTGCCTACAGACACTGCCATGCTGACCCTGCTCCGCCTAGAGCCCCACCATGT
CATCCTAGAGGGCCACCAGCTCTGTCTCAAGGACCAGCCCAAGAGCCGCTACTTCCTGCGTCAGCCTCGG
GTCTACACCCTGGACCTTGGCGCTGAGCCTGGGAGCCAGACTGGGCTCCCTCAGGACACAGCCCCTGACA
CCAGGCCGGTGCCCATCCCCAGTCACTACTCTCTCAGAGAGTGTGTCCGCAACCCTCACTTCCGGATCTT
CGCCTATCTGATGGCTGTCATCCTCAGTGTCACCCTGCTGCTCATCTTCTCCATCTTTTGGACTAAGCAG
TTCTTTTGGGGCATGGGGTGAGCACTCTGTGTTCCAGGACAAGGAACAGAGCCTTTCTCAGTGGTTGCTG
GACCGAGGACTATTGCGAATCCTTTGGTGTTACCGTTCTTGCTCATTTTACAGCCCAGGGGTCTGCTAGG
TCTATCTTGGAGAACAGAGACGGCCCAACAGGAAGAGAAGAGCTAAAGGACCAGGGACCTGATCATAAAC
TACGGGGTCATGGAGGGTAGAGAAGCAGTTCTATGGCTACATAGCAAGTTGTGCCAAAAGGGCTGGACAG
CACCACCCAGACATCCAACTAGTTGAGAGAGCTCGGAGCCTCTTTCACTGGAGCAGTGTTGAGCTGTTTG
TGTGTTGCTGATAATTCTGGAAAGTGTTTCAATTCTGTGGGCCCACGTGCTTGTCTCCCCTTTCAGCCTT
TCCTGATTCTTGCCACAGTTTCCAGTAAAGCTAGCCTGCATTCTTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5252940 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5252940 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7070 same embryo
 EMAGE:7071 same embryo
 EMAGE:7067 same embryo
 EMAGE:7069 same embryo
 EMAGE:7068 same embryo
 EurExpress:euxassay_002501 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS