Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7152

Polr3gl polymerase (RNA) III (DNA directed) polypeptide G like ( MGI:1917120)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152
"Pseudo-wholemount" of euxassay_002608. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002608_01 euxassay_002608_02 euxassay_002608_03 euxassay_002608_04
EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152
euxassay_002608_05 euxassay_002608_06 euxassay_002608_07 euxassay_002608_08 euxassay_002608_09
EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152
euxassay_002608_10 euxassay_002608_11 euxassay_002608_12 euxassay_002608_13 euxassay_002608_14
EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152
euxassay_002608_15 euxassay_002608_16 euxassay_002608_17 euxassay_002608_18 euxassay_002608_19
EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152 EMAGE:7152
euxassay_002608_20 euxassay_002608_21 euxassay_002608_22 euxassay_002608_23 euxassay_002608_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7152Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7152_wholemount_strong.wlz
7152_wholemount_moderate.wlz
7152_wholemount_weak.wlz
7152_wholemount_possible.wlz
7152_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7152_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5249
Entity Detected:Polr3gl, polymerase (RNA) III (DNA directed) polypeptide G like ( MGI:1917120)
Sequence:sense strand is shown

>T5249
ATTTCAAGTTGGCGGCTGCGTGGGCCCTGAGTGGGGGAGGGACGGCAGGTTTTTCTCACTGGATCTCTGC
ATATCCAGGCCCCCTCCACCATGGCCAGCCGGGGTGGGGGCCGGGGTCGTGGCCGGGGCCAGTTGACCTT
CAACATGGAGGCTGTGGGCATTGGGAAGGGTGATGCTTTGCCCCCACCCACTCTCCAGCCCTCTCCACTC
TTTCCTCCCTTGGAGTTCCACCCAGTGCCTCTGCCGGCAGGAGAGGAGGGGGAGTATGTCCTGGCACTGA
AGCAAGAGCTGCGCGGGGCCATGAGGCAGCTCCCCTACTTCATCCGGCCAGCCGTCCCCAAGAGAGATGT
GGAACGTTACTCAGACAAGTATCAGATGTCTGGGCCTATTGACAACGCCATCGATTGGAACCCTGATTGG
CGGCGACTCCCCAGTGAGCTCAAGATTCGAGTGCGGAAAGTACAGAAGGAGCGGACCACCATTATCCTTC
CCAAGAGGCCCCCTAAGAGCACAGACGATAAGGAGGAGACGATACAGAAACTAGAGACGCTAGAGAAGAA
GGAGGAGGAAGTGACTTCGGAGGAGGATGAAGAGAAAGAAGAAGAGGAGGAGAAGGAAGAGGGGGAGGAA
GAGGAATACGATGAAGAGGAGCATGAGGAGGAAACTGATTACATCATGTCATATTTTGACAATGGAGAGG
ACTTTGGAGGGGACAGCGATGACAATATGGATGAGGCCCATATACTGAAAAACCTGGGCATAGACTGAAA
ACCTGGGCCATAGACTGAAAACCTGGGCCCATATATCATTCTTGATTTGAGATACAGGAACTAAATATCC
CTATGTACTTAGGGGTTTTCCTATTTTTGTTATTTGTTTTGTTTTGTTTTGGTTGGTTGGCTTGGTTTGT
TTTTTCCAGACAGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTC
AAACTCAGAAATCCGCCTGCCTCTGCCTCTGCCTCTGCCCCCCAAGTGCTGGGATTAAAGGCATTCGCCA
CCATGCCCAGCTTTGTTATTGTTTTTTGAGAGAAGATCTCATGTAGCTCAAGCTGGCCTGGAACTCGGTA
TGTAGCTGAGGCTGGCCTTGAATTTTGGACCCCCCCCCACCCCCCCAAGCCTTGGGATTACAGGGACGCG
CCACCACAGCAGACTTACTAGCATTTACTTCTGTTGAGAAAAAATTGGTTAGAATCCAGGTGACCTGTGT
GATCCCTGGGGGCTGTGATGCGCAGCCGTTGACAGTTTAGGGGAGACTTGGGGTGGGAACAGTCAAGAGG
AGTAAGGCCTGTTTTGTACTTTTAAATAAAATGTTTGTATCTGTCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5357914 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5357914 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7154 same embryo
 EMAGE:7151 same embryo
 EMAGE:7153 same embryo
 EMAGE:7155 same embryo
 EMAGE:7156 same embryo
 EurExpress:euxassay_002608 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS