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EMAGE:7253

Spin4 spindlin family, member 4 ( MGI:2444925)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7253
euxassay_004317_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7253Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7253_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7253_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5084
Entity Detected:Spin4, spindlin family, member 4 ( MGI:2444925)
Sequence:sense strand is shown

>T5084
CCACGCGTCCGGCTGGGAGACGTGCTACTGCCTGCACTTTCGTGGCCGCGAAACATCCCTGTTATCTCCG
GTCCAGGTTAACAGTCCACTTCTTCTCTGTTGCCGTTCTGCGACCGCAGCAGCGTTGACAACAGCTAAGT
GGCGGATTCTGGCTGGGACGTGGGCTTGGGAGTCCGGGAAGGCGCCAGGGGCGGACAGAACGAACCCGGG
AGCCCGCCATCTCTCTGGAGCCATCACTATTGCAGTCACCCCTCCCTGAAGGAGGAAAAAAGCACTAGTG
AGCGGCACTCTCTGTCTCAGTTCCCAGTCAGTTAGCTCTTTTCTGACAAAATCTGAAAAGAGGACTGATA
CAGTCTCTCGGATCGCGAAAAATATCTGCCGTTGGACACTGCTGACTGTTAGTCAGCTTGTTAAGCAAAG
AGCAGCTTTACTTTGGCCACCGAAGCCTCGAGCCATGTCTCCTCCGACTGTGCCTCCTACTGGGGTGGAT
GGTGTGTCCGCGTACCTGATGAAGAAAAGGCACACTCACAAGAAGCAGCGCCGTAAGCCCACTTTCCTCA
CTCATAGGAACATCGTGGGCTGCCGCATTCAACACGGCTGGAAAGAAGGCAATGAGCCCGTGGAGCAATG
GAAAGGTACTGTGCTCGAGCAGGTCTCCGTGAAGCCCACTCTGTATATCATCAAATATGATGGCAAAGAC
AGTGTGTACGGACTGGAACTGCACAGAGATAAGAGAGTTTTAGCGCTGGAGATTCTTCCTGAGAGAGTTC
CTTCTCCTCGCATTGACTCTCGCCTGGCCGATTCCCTGGTTGGGAAGGCAGTGGGACATGTGTTCGAAGG
TGAGCATGGCAAGAAAGATGAGTGGAAGGGTATGGTGTTGGCGCGAGCCCCCATCATGGATACTTGGTTT
TACATCACCTACGAGAAAGATCCGGTCCTCTATATGTACACCCTGCTGGACGACTACAAAGATGGTGACC
TGCGTATCATTCCAGATTCCAACTACTACTTCCCTGCAGCTGAACAGGAGCCTGGGGAGGTGCTCGACAG
CCTTGTGGGCAAGCAGGTGGAACACGCCAAAGACGACGGGTCCAAGAGAACTGGGATCTTTATTCATCAG
GTGGTAGCCAAGCCATCTGTCTACTTCATTAAGTTTGATGATGATATTCACATTTATGTCTATGGCTTGG
TGAAAACCCCGTAAGTTTATAGACCTCTTTGCGAAACGTGTGGAACTATCAGAGGATAAATATTTTATGT
TCTCAAAATTAAGTTTTTCTGAGGTCAATTTTGAGGTCAAAAGTTCTGGACAGTGGCTAAATCTTATTGT
GCCTCCATATCTTATATTGACTGTTTTCCAGTTCTGACTCAAGTATATGTTGGTACTTTTGTTCTTTGTT
TTATAATTGAAATTTTAAATTGGCTGCTAAGAAAAAAAGAGAAGTGTTTGGATTCACCGAAACAACTCAA
AAGTAGATAAACTGTGCAACGTGGCTTCTGCTCCCTTCCCCCTCTTTCTAATTCTTCCCCTTAGTTTGAG
AATTTGGCATTTTTCTTGGGATGTTTTCCCTGCTCTCAAGCAGAAACTTCAATGTAACTTTTGTAAAACT
GACTTCCATATGATATGGTTTTTGATAAATGGCACAGTCAGTCTCTGTCCGTCACTCTCATACTTCCTCT
CACCAGTGTTCACAGTCCATACAGATGTGCCAAAAAGTATCCATTCTGGTATTGGTGGGCATTTATTTCC
TTTTTTACTCATAATGATGTTTTATTGTATTAAGGTGCTCTTATTTCTATAGAAGTGTTATGTAGGTGTA
TATTTAGTTTTAAGAACTATTGCAAGGTTGCCATCCACTGGTCTTTGATGTTTGCAACGCTGACAGGTAG
AACGTTCCATGGGTTCCTGATTATTTGATGTTTACCTGACTCAATGAGACTTATTTTTTTCTACTTGGGA
TATTTCTCTTTTTTTGTTTTGCTAATTCCTATTCTTTGTTTCTTGTCTATATATACATATATATATTCAG
TTGATATTTTCCATGTAAAGTTATAGGAATTTCTACAATGAAAGTACATTTAATCTTTTTTATTTCATGT
GTTAATGAACTTTATATTGTTATTAATCTTTATTGTTCACTTTACAATTTTAAAAACTTAATTTTATAAT
TTTTAAATGTTTATGTCTTTTATAAATTTTTAGTTTCCTATCTTTTTCAGACAGGTGTCCCTAACCTAGG
TCATACCAATATTCACTTGGTTTTTCTTTTATAATCTTTATTATATTTAAATTTTTATCTACCTGAAATT
CATTTTTGCATATGCTAATACATAGGGACTCAACTCTAAATATTTTGCATTACATATTCTACTGTAGAAA
TTACTTTTTAAAAAATCACTCTTTTTCAAATTTCTGAGTGAAAGTTAATTTTAAACATAATACCAGACCA
TGAGTTTCAGAAACTGGAATAACAAATTCCCTTTCAATAGTTGTTTTTCTTTCTTATTATAATTTATCCT
CAACATTCATCCTTTCAAGAGAAAAAAAAAACAATGCATTTTATTGATATTTTGAAAGGGTCTGATACTT
ATCAGAATTGCATCAATTTTCTGTATTCTTATATACAAGAATAAAATTAATAGTGATATTCTTACCACAC
AAGAGATTTGGTAGATCATTGAAATATTTTTATCTTGTTTTCATAACATTTTTTCATATAGGTCATTCAT
ATCAAATGGAATTTATTTTTGCAGTTATCAAATTTTGTAATAAGTTGAATATTTTTCCATCTTATAAGTA
ACTTTTTATTTTTATCAATAAAGCAAATCTACAGATTTTATATTTTTATCTTTTATCCAATGAGTTTATT
TAATCCTATATGTTACATTGGATGTTAAATTAGAAACTTGGATTTTCTTGATATATACAATCATTTTGTA
TGTAAATACAGATAATTTTATTTCTTCTAATGCTTATACTTATTAGTATAACATTAGCTGGATTTTCCAG
AGCAGTGTTATGTGATGATGATGGCAGACATGCCTTTTTCTATTTCTAATTTTTATGAGAATGACTTTAT
TGTTTCATGTGTGACTTTGTTGTTGATTGTTGGTAAGTAGTTATTCATGTTTAGAAATTCCTTCTGTTCT
TGTTTTTATATAGTATTACTATTAGAAATGTCTCCTTGATTTTATCAATGTCTTTTCAATATCCATTATT
AAACATATAGTTTTTTTAATTTGTTGATGCATGATTTATTAGAAAGCTAGGTACTTAGTATTACAACAAA
CCTTTATTTCTGGAATAAATCCTACTTGGTTATGGTAAAATAGCCATTTATTATTTTGTCGTATTTTATT
TACCAATAATGCACTTATACTTGATTTGCATTCCAAAGTAAAATTACAGTTTTAGATTACTCTTTGTATT
TTTAATTGAATTAACAGACAACAGGTTGTGTCTTTTTTTCATAAGCTGTCTCTATGAAGCTTTGTCATTA
AAATTCTATTAGCTTAAAAAATGACTGAGTAAAATAGCACTAGAAGTTTTTTTTTTTTTTAAGTTACCTG
AGACTAAGCTATAAAACATTGAAATCCTGGGAATGAATTTTATTAGGTATCTTTAATGCATTCCCTGATA
TTTTCTCAGTGGCAATTGGCTTTTTCAGACTTTTTGTTACTACAGAATATATATTTTTCTGTCATTTACA
GAATATATATTCTCTGTCAATTACACACGAAGTTGAAAGCTGCTTATATTATAAAATTTGCTGATTATTT
TTATGTGCTGTATGTCATTATGTATTAGCCCAGTTCAGAAAATGTAATAAATTCATCAGCTATAATGGTA
GTATAATTATCTTTGTATTCTTTTATTTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5323183 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5323183 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7252 same embryo
 EMAGE:7251 same embryo
 EMAGE:7250 same embryo
 EMAGE:7249 same embryo
 EMAGE:7248 same embryo
 EurExpress:euxassay_004317 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS