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EMAGE:7375

0610007P14Rik RIKEN cDNA 0610007P14 gene ( MGI:1915571)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375
"Pseudo-wholemount" of euxassay_004476. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004476_01 euxassay_004476_02 euxassay_004476_03 euxassay_004476_04
EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375
euxassay_004476_05 euxassay_004476_06 euxassay_004476_07 euxassay_004476_08 euxassay_004476_09
EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375
euxassay_004476_10 euxassay_004476_11 euxassay_004476_12 euxassay_004476_13 euxassay_004476_14
EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375
euxassay_004476_15 euxassay_004476_16 euxassay_004476_17 euxassay_004476_18 euxassay_004476_19
EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375 EMAGE:7375
euxassay_004476_20 euxassay_004476_21 euxassay_004476_22 euxassay_004476_23 euxassay_004476_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7375Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7375_wholemount_strong.wlz
7375_wholemount_moderate.wlz
7375_wholemount_weak.wlz
7375_wholemount_possible.wlz
7375_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7375_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6480
Entity Detected:0610007P14Rik, RIKEN cDNA 0610007P14 gene ( MGI:1915571)
Sequence:sense strand is shown

>T6480
GCCTGGGGAGAGCTGGTTTGCGGATGCTGCTGATACTGCTGCAGTAGTACTGGATCGTCAGGCAGAGCGC
CCTCTCTTAGAGGGGAATCATGAGCCGCTTCCTGAATGTGTTACGAAGCTGGCTGGTTATGGTGTCCATT
ATAGCCATGGGGAACACACTCCAGAGCTTCCGAGACCACACTTTTCTCTACGAGAAGCTCTACACTGGCA
AGCCAAACCTTGTGAATGGCCTCCAAGCCCGGACCTTTGGGATCTGGACGCTGCTCTCATCAGTGATTCG
CTGCCTCTGTGCCATTGACATCCACAACAAAACACTCTATCACATCACACTGTGGACATTCCTCCTCGCC
CTGGGACACTTCCTCTCAGAGTTGTTTGTATTTGGAACAGCAGCTCCCACAGTTGGTGTGCTGGCACCCC
TGATGGTAGCAAGTTTCTCAATCCTGGGCATGCTGGTCGGGCTCCGGTACCTAGAGGCAGAACCAGTATC
CAGACAGAAGAAAAGAAATTGAGGCCAGCCTTGCCAGCTCTGAAACATCGTCTTCCACCTCCACTGTCTT
CTTCATTCACCCTCTATCCTTAAACCATTTCTGTTTGGCTGCATCCTTAGCTCCTTCATCTAGGTTCAGC
ATCTTAAGCTTTTGAGAGGGTTTTTTGTTTTTTGATCTTAAATTTTGGTTTTTGGGGTTTTTTTATGTTT
TTAAATTTTTTAAGGTATTCATAAGAAAAATTACTTAACATGTATGTATAATTTAGGAGTCATTTAAAGA
AAATACTCTTGTTAGTCCTTCAAAGTCAAGGAATTCTGAGAAGCCCCCTAATGTGTCCTCCCCTAGCTAT
AACCCCTCTAGCTCCTTTTCCAGTCTTTTGCTTTTCTCTGCATTCCTTGATCTGTTGTGGTGGGAACATA
ACTGTGAAGCCGCAGCTGCTGCCTGCCCAGAGCAGCCACGGGCAAGGGCTGCTTCAAGGTCCTGAGCACA
TAGACTGGGCTCCTTTCTATTGCTGGGCCCAGGGGACAGGCAGTTCTTCTGAGAAGGACTGCCCTCATGA
GCAGGACCAGGCTCCTCTTTTATCTACAGGTGGATGAAGGTTGGAAGAGTCTGGGCTGTTTTTAGACCTT
TTGGTCAATTGTATTTGTGTAATGCATTTTATAATAAATAGGGAAACCTTCTATTCTGAAAAAAAAAAAA
AAA
Notes:The probe template was PCR amplified from IMAGE:3587693 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3587693 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7374 same embryo
 EMAGE:7371 same embryo
 EMAGE:7373 same embryo
 EMAGE:7372 same embryo
 EMAGE:7370 same embryo
 EurExpress:euxassay_004476 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS