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EMAGE:7388

Ring1 ring finger protein 1 ( MGI:1101770)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388
"Pseudo-wholemount" of euxassay_004535. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004535_01 euxassay_004535_02 euxassay_004535_03 euxassay_004535_04
EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388
euxassay_004535_05 euxassay_004535_06 euxassay_004535_07 euxassay_004535_08 euxassay_004535_09
EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388
euxassay_004535_10 euxassay_004535_11 euxassay_004535_12 euxassay_004535_13 euxassay_004535_14
EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388 EMAGE:7388
euxassay_004535_15 euxassay_004535_16 euxassay_004535_17 euxassay_004535_18 euxassay_004535_19
EMAGE:7388 EMAGE:7388 EMAGE:7388
euxassay_004535_20 euxassay_004535_21 euxassay_004535_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7388Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7388_wholemount_strong.wlz
7388_wholemount_moderate.wlz
7388_wholemount_weak.wlz
7388_wholemount_possible.wlz
7388_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7388_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5755
Entity Detected:Ring1, ring finger protein 1 ( MGI:1101770)
Sequence:sense strand is shown

>T5755
GCCATGGCGGCGGTGGCGGTGGCAGCAAGGGTTGCGGCGTGAGTGGCAGCTGCGGACCGAGCGGACCAGG
GCAGCGGAGCCCCGGGGTTCCTGGGGAGAGGCCCGCAGCAGGGCAGCGCGAAGGCCGGAGCTGGACCTCT
CTCAGCGGAGCCCCGCTTGGAGGGGGAGGGTCTATGCCCCGTCACCATGACGACGCCGGCGAATGCACAG
AATGCCAGCAAAACGTGGGAACTGAGTCTCTATGAGCTGCACCGGACCCCGCAGGAAGCCATCATGGATG
GTACAGAGATTGCGGTTTCGCCTCGGTCACTGCATTCTGAGCTCATGTGTCCCATCTGCCTGGACATGCT
GAAGAACACAATGACCACCAAGGAGTGCCTGCATAGGCTCTGCTCGGACTGCATCGTCACCGCCCTGCGG
AGCGGGAACAAGGAGTGCCCTACCTGCCGGAAAAAGCTGGTATCCAAGCGGTCCCTACGGCCGGACCCCA
ACTTCGACGCCCTGATCTCCAAAATCTACCCTAGCCGGGAGGAATATGAGGCCCATCAGGACCGGGTGCT
CATCCGCCTCAGCCGCCTGCACAACCAGCAGGCGCTGAGCTCCAGTATCGAGGAAGGGCTCCGGATGCAG
GCCATGCACAGGGCCCAGCGTGTGAGGCGGCCGATGCCTGGATCTGATCAGACCGCCACAATGAGTGGGG
GGGAAGGAGAACCTGGGGAGGGAGAAGGGGATGGAGAGGATGTAAGCTCTGACTCCGCCCCAGACTCTGC
TCCAGGCCCTGCTCCCAAGCGACCCCGCGGAGCGGGTGCAGGGGCCAGCAGTGTAGGGACAGGGGGTGGG
GCTGCTGGTGGGGCTTGCGGGGGTGCCGGTTCTGAAGACTCTGGTGACCGGGGCGGCACCCTGGGAGGGG
GAACCCTGGGGCCCCCAAGCCCTCCTGGGGCCCCCAGCCCTCCAGAGCCCGGTGGAGAGATTGAGCTTGT
GTTCCGGCCCCATCCCCTGCTTGTGGAGAAAGGAGAGTACTGCCAGACTCGGTACGTGAAGACTACTGGG
AATGCCACAGTGGATCATCTCTCCAAGTACCTGGCCCTGCGCATTGCCCTGGAGAGGAGGCAGCAGCAGG
AAACCGCAGAGCCCGGAGGGCCTGGTGGGGGTGCTTCGGACACAGGCGGACCTGATGGGGGTGGTGGGGA
GAGAGGCGTTGCCGGAGGAGGCGAAGGTCCTGAGGAGCCTGCGCTCCCCAGCCTGGAAGGTGTCAGCGAA
AAGCAGTACACCATCTACATCGCTCCTGGGGGCGGAGCGTTCACGACGCTGAATGGATCACTGACCTTGG
AGCTTGTAAACGAGAAGTTCTGGAAGGTGTCCAGGCCCTTAGAGCTCTGCTATGCCCCCACGAAGGACCC
AAAATGATGTCACAAGGGGACAGCTGGAACATGGGGACCACAGGGTGTCTCTGTGTCCCAGCTCAGCCTG
CCAGCTTCATCTCCTAAAGCCCCCCAGCCAGACAGCAAGAGGACAAAGGAGGACAAATGGCTTTTATACA
AAGTATCTATATTGAATTAGTCTATATTGGACAGCACGGGCCCTGTACCCACTACTGCCTTTTCTATAGA
CCCTAGGTTCCCACCCTGCTGGTGATAGGCAGGGTGGACAAGACCCCCTCCCCGCCCTCCTCCCAACAAC
AAATTTGCTTATTTCTTCTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2651194 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2651194 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7389 same embryo
 EMAGE:7390 same embryo
 EMAGE:7391 same embryo
 EMAGE:7392 same embryo
 EMAGE:7393 same embryo
 EurExpress:euxassay_004535 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS