Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:7790

Nol12 nucleolar protein 12 ( MGI:2146285)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:7790
euxassay_007422_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:7790Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
7790_wholemount_strong.wlz
7790_wholemount_moderate.wlz
7790_wholemount_weak.wlz
7790_wholemount_possible.wlz
7790_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:7790_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9084
Entity Detected:Nol12, nucleolar protein 12 ( MGI:2146285)
Sequence:sense strand is shown

>T9084
GTTTTAAAGTCAGAAGCGGCCACGCTGCCGGAAGCTTCACTGCAATGGGCCGCAACAAGAAGAAGAAGAA
AAGAGATGGAGACGACCGGCGGCCCCGGCTCGTTCTCAACTTTGATGAAGAGAAGCGGCGGGAGTACCTG
ACAGGCTTCCACAAGCGGAAGGTAGAGCGCAAGAAGGCAGCCATTGAAGAGATAAAGCAGCGGCTTAAGC
AAGAGCAGAAGAAACTTCGGGAAGAGCGCCACCAGGAGTACCTGAAGATGCTGGCAGAAAGAGAGGAAGC
ACTGGAGGAGGCAGATGAGCTGGAGCGGCTAGTGACAGCGAAGACAGAGTCGGTGCAGTATGACCACCCC
AATCACACAGTCACTGTGACCACCATCAGTGACCTGGACCTCTCAGGGGCCCGGCTGCTAGGTCTGCCCC
TGCCTGAGCAAGGGGACCAGGATGGGTCCCAGGAAGAGGAGATGTCATCCCTGGAAAAGCCAACAAAAGC
CTTGCCCAGGAAGTCCAAAGATCCCCTGCTCTCTCAGCGCATCTCCTCCCTCACAGCTACACTGCACGCA
CACAGTCGGAAGAAGGTCAAGAGGAAACACCCTCGGCGGGCACAGGACTCCACCAAGAAACCTCCAAGTG
CCACACGTACCAGCAAGACCCAGCGCCGCCGTCGGATGACTGGAAAAGCCAGGCACAACGGGGAGTGAGC
CCTCAAACCTGGGGGTCCCAGCTTGAGTCCTTGGCTGTCCCTGTAACCCAGCTACACCGAGGGTTACCTG
CAGCCTAAGCCTGAAAATCAGGACTTTGCCATCCAGGGTCATCCTTGCTTTGAACCCAGAAGGAACGGAC
TTCTGAGAGCCCGGGTTCCCGGAGCCTGCAGAACCGTGCTGGGGCTCGTTCACAAGTGTACATCCACCTG
GGACTGAAGAGAAGTGTGAAACTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6819926 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6819926 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:7787 same embryo
 EMAGE:7788 same embryo
 EMAGE:7786 same embryo
 EMAGE:7789 same embryo
 EMAGE:7791 same embryo
 EurExpress:euxassay_007422 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS