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EMAGE:8207

Fus fusion, derived from t(12;16) malignant liposarcoma (human) ( MGI:1353633)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:8207
euxassay_005326_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:8207Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
8207_wholemount_strong.wlz
8207_wholemount_moderate.wlz
8207_wholemount_weak.wlz
8207_wholemount_possible.wlz
8207_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:8207_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7782
Entity Detected:Fus, fusion, derived from t(12;16) malignant liposarcoma (human) ( MGI:1353633)
Sequence:sense strand is shown

>T7782
GCATCGCTTCGCGGTCGTCTGGAACTTTGTTGCTTGGCGGCCTGCGCTGCGCGCGTGCGCGGACATGGCT
TCAAACGACTATACCCAACAAGCAACTCAAAGCTACGGGGCCTATCCTACCCAGCCTGGGCAGGGCTACT
CCCAACAGAGCAGTCAGCCCTATGGCCAACAGAGTTACAGTGGTTATGGCCAGTCAGCTGACACTTCAGG
ATACGGCCAGAGCAGCTATGGTTCTTCTTATGGACAGACCCAAAACAGCTATGGAACTCAGTCAGCTCCC
CAGGGATATGGTTCCACTGGAGGCTATGGCAGCAGCCAAAGTTCACAATCTTCTTATGGGCAGCAGTCCT
CCTACCCTGGCTATGGCCAACAGCCAGCTCCTAGCAGCACCTCAGGAAGTTATGGTGGCAGTTCTCAGAG
CAGCAGCTATGGGCAACCCCAGAGTGGAGGTTATGGTCAACAGTCTGGCTATGGTGGACAGCAACAAAGC
TACGGACAACAACAAAGCTCCTATAACCCACCTCAGGGTTATGGACAACAGAACCAGTACAACAGTAGCA
GTGGAGGTGGTGGAGGGGGTGGTGGAGGCAACTATGGCCAAGATCAGTCCTCTATGAGTGGTGGCGGTGG
CGGTGGTGGTTATGGCAATCAGGACCAGAGTGGTGGCGGCGGCGGCGGCTACGGGGGAGGCCAACAGGAT
CGTGGGGGCCGAGGCAGGGGCGGTGGAGGTGGTTACAACCGAAGCAGTGGTGGCTATGAACCCAGAGGCC
GTGGAGGTGGCCGAGGAGGCAGAGGCGGCATGGGCGGAAGTGACCGCGGTGGCTTCAATAAATTTGGTGG
TCCTCGGGATCAAGGATCTCGTCATGATTCTGAACAGGATAATTCAGACAACAATACCATCTTCGTGCAA
GGCCTAGGCGAGAATGTTACAATTGAATCTGTGGCTGATTACTTCAAGCAGATTGGAATTATTAAGACAA
ACAAGAAAACTGGACAGCCTATGATTAATTTGTACACAGACAGGGAAACTGGCAAGTTGAAGGGTGAGGC
AACAGTTTCATTTGATGACCCACCTTCTGCTAAAGCAGCTATCGACTGGTTTGATGGTAAAGAATTCTCT
GGGAATCCTATTAAAGTTTCATTTGCTACCCGCCGAGCTGACTTCAATCGGGGTGGTGGAAATGGTCGCG
GAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGAGGAGGTGGCAGTGGTGGTGGTGGCCG
GGGAGGATTCCCCAGTGGAGGTGGTGGAGGTGGAGGACAGCAACGAGCTGGAGACTGGAAGTGTCCTAAT
CCTACATGTGAGAACATGAACTTCTCTTGGAGAAATGAATGCAACCAGTGTAAGGCACCTAAGCCAGATG
GCCCAGGAGGGGGACCAGGAGGCTCTCATATGGGGGGAAACTATGGAGATGATCGACGTGGCAGAGGAGG
ATATGACCGGGGCGGCTACCGGGGCCGAGGAGGGGACCGTGGGGGCTTCAGAGGGGGCCGGGGTGGTGGG
GACAGAGGCGGTTTTGGCCCTGGCAAGATGGACTCCAGGGGCGAGCACAGACAGGATCGCAGGGAGAGGC
CATATTAGCCTGGCTCCTGAAGTTCTGGAACTCTTCCTGTACCCAGTGTTACCCTTGTTATTTTGTAAAC
TTACAATTCAGGATCGCTCATGGATATTTTTTTTTGGGGGGGGTGGGGCGGTTGTGTGTGTATGTGTGTG
TGTGTGTGTCAGACTACCCTAATTGTAACCATATCTCTGGTTCCCATTAAAAAACATCATTTTAGTTAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6314291 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6314291 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:8209 same embryo
 EMAGE:8205 same embryo
 EMAGE:8206 same embryo
 EMAGE:8204 same embryo
 EMAGE:8208 same embryo
 EurExpress:euxassay_005326 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS