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EMAGE:9625

Tgtp2 T-cell specific GTPase 2 ( MGI:3710083)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625
"Pseudo-wholemount" of euxassay_018493. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018493_01 euxassay_018493_02 euxassay_018493_03 euxassay_018493_04
EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625
euxassay_018493_05 euxassay_018493_06 euxassay_018493_07 euxassay_018493_08 euxassay_018493_09
EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625
euxassay_018493_10 euxassay_018493_11 euxassay_018493_12 euxassay_018493_13 euxassay_018493_14
EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625 EMAGE:9625
euxassay_018493_15 euxassay_018493_16 euxassay_018493_17 euxassay_018493_18 euxassay_018493_19
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euxassay_018493_20 euxassay_018493_21 euxassay_018493_22 euxassay_018493_23 euxassay_018493_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9625Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9625_wholemount_strong.wlz
9625_wholemount_moderate.wlz
9625_wholemount_weak.wlz
9625_wholemount_possible.wlz
9625_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9625_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T51111
Entity Detected:Tgtp2, T-cell specific GTPase 2 ( MGI:3710083)
Sequence:sense strand is shown

>T51111
CTGTCTTTGCAAAGTCTTACTGAGGCCACCATTAACTACAAGAGAGATTCCCTGAAGCAAAAAGTCTTCC
TAGGAGCCATGAAGGCTGGAGCATTAGCCACCATTCCACTTGGTGGCATGATCAGTGATATCTTAGAGAA
TCTGGATGAAACATTCAATCTCTACAGGTCTTACTTTGGGCTGGATGATGCTTCACTGGAAAACATTGCC
CAGGATTTGAACATGTCTGTGGATGACTTCAAGGTACACCTTCGATTTCCCCATTTGTTTGCAGAACACA
ATGATGAGTCCTTAGAAGACAAGCTATTTAAATATATCAAACACATTTCTTCAGTTACTGGTGGGCCAGT
CGCTGCAGTCACTTACTATCGCATGGCTTATTATTTGCAGAATCTCTTTCTTGATACTGCAGCCAATGAT
GCCATAGCTCTTCTGAATAGTAAAGCACTTTTTGAGAAGAAGGTGGGACCATATATATCTGAGCCCCCCG
AGTACTGGGAAGCTTGAAAAAATAAGGCATGAGTTCCAATCAGTGTTCACTCTTAGCTTCACCTTGGGCA
CGATTTTTAGCCTAGTCCCGATGGGGGAAAAAGTCTCAGTGGCAGGCCAGAGGATTCATGCTTTCCCTTC
TCCTGATCCAGAAGATCACCATGGCAAAGGCTTATAGTGCTTAGAGTAGAAAAGAAGTGTCTTCAACATC
GTGCAAATATGACAGCAAAGTATATTTGCATTAAAATCATTTCTTAAAAATAAAACAAACACATGATGTG
GATTTGGTTTGCATTTTTCTCCTCAAATGAATCCTGAATCTTTTACTCCTATGAAAGTTTTCATGTGCTT
TTACATTCTCACTGGCAGCCCTGATTGTCACATTGCCAAGTGGTATTTTGGAAACAGGGACATCGGGTAC
CCTACAGAGTGTAGACAAACACGTTTTGACCCAGAACTGGGTGTTCCAGGAGATTCTACATGTTGTCAAG
TGAACAACTAACATTAATAACCCCATGTGCTAACCAAACCCAGGCTCTTTGCTGACCATGGTAGTATTGG
TGCTTTGTCACTAAGGCATGTAAGCACCTCCACATTGCTTCTTCATAGGTGTATAGATGTATGG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:unspecified; Reverse Primer - name:unspecified, sequence:unspecified. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9624 same assay
 EMAGE:9623 same embryo
 EurExpress:euxassay_018493 same experiment
 EMAGE:9622 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS