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EMAGE:9798

Ube2r2 ubiquitin-conjugating enzyme E2R 2 ( MGI:1914865)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798
"Pseudo-wholemount" of euxassay_018719. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018719_01 euxassay_018719_02 euxassay_018719_03 euxassay_018719_04
EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798
euxassay_018719_05 euxassay_018719_06 euxassay_018719_07 euxassay_018719_08 euxassay_018719_09
EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798
euxassay_018719_10 euxassay_018719_11 euxassay_018719_12 euxassay_018719_13 euxassay_018719_14
EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798
euxassay_018719_15 euxassay_018719_16 euxassay_018719_17 euxassay_018719_18 euxassay_018719_19
EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798 EMAGE:9798
euxassay_018719_20 euxassay_018719_21 euxassay_018719_22 euxassay_018719_23 euxassay_018719_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9798Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9798_wholemount_strong.wlz
9798_wholemount_moderate.wlz
9798_wholemount_weak.wlz
9798_wholemount_possible.wlz
9798_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9798_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T51175
Entity Detected:Ube2r2, ubiquitin-conjugating enzyme E2R 2 ( MGI:1914865)
Sequence:sense strand is shown

>T51175
AGGTGGTTAGTGTGTGTGCGTTCCTGGTTCTGAAACCACAGAAGGCCTATCCCAGTGTTGGCTGATGCCT
CGGGGGAAGGAAGAGTGAGGGCTGCGGCGGGAGGATGCAGCCCAGGTACTCATAAGAGGGTTGATTTAAG
TAGCCACTTTAATTACTCAGTGTTAGTCCTACATGCATGGGTTAAGATTGTGCTGTCTTTGAGCTGCGTA
TCTTGATAGTGACAACTGTGGATGTGTGCAGCTTGGGACTGGTCCTTTTCCTCACTGGAGATGATCTGGA
CTTCTTGTACTTTGGCCAAGGAGTGCAAGCAGAAATGGTGTGCGGAGCTTCCCCTGGCCCCAGCTGACTC
CAGGCAGCCTTGTTTCCTGGGTGTCAGTCACACGTGGCTCCCCCAAGCCTGAGCTCCGGTAGCTTCATCC
TAGACTTGAAAGAGGGTTTTGTTTAGCAAACTGTCTAAGTAAAGCCAGACTTCAAGGATAGGGCTTAAGA
TTCGTGTGTGCCAGGGTCACAGCTCGGAACCAAAGGGCAGAGGGAAACTGGGAAGGACTGACCCTCTGGT
TAAGTAGACAGACCATGCTTCCTCCTCTCATGGTTCCCTTTCCTTTCTGATCTCAGGGTTTTCATTCTCT
CTTCACACTCCTGAACGAATGCTATTTCCCTGGCTTCAAAAGTTCGGTCTGTTATCAAATGAGAATGTTT
AGTGGTGAACAGTGAAATTTAGTGAGTTTACAGTCAGGGCTGTACCTGAGTCTCCTGACTCAGGAACACA
GTAAAGAGACATTTCGAGTTTGTTGCTCCCAGATAGCCTGCAGATAGATGTACAGCCAAATCCTCTCTGA
TCCTCCTTCCCCAGTGCCCACCTGCCTACCACT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:AGGTGGTTAGTGTGTGTGCG; Reverse Primer - name:unspecified, sequence:AGTGGTAGGCAGGTGGGCAC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9793 same embryo
 EMAGE:9794 same embryo
 EMAGE:9796 same embryo
 EMAGE:9795 same embryo
 EMAGE:9797 same embryo
 EurExpress:euxassay_018719 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS