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EMAGE:9839

Rps6ka6 ribosomal protein S6 kinase polypeptide 6 ( MGI:1914321)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:9839 EMAGE:9839 EMAGE:9839 EMAGE:9839 EMAGE:9839
"Pseudo-wholemount" of euxassay_018802. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018802_01 euxassay_018802_02 euxassay_018802_03 euxassay_018802_04
EMAGE:9839 EMAGE:9839 EMAGE:9839 EMAGE:9839 EMAGE:9839
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euxassay_018802_10 euxassay_018802_11 euxassay_018802_12 euxassay_018802_13 euxassay_018802_14
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euxassay_018802_15 euxassay_018802_16 euxassay_018802_17 euxassay_018802_18 euxassay_018802_19
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euxassay_018802_20 euxassay_018802_21 euxassay_018802_22 euxassay_018802_23 euxassay_018802_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:9839Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
9839_wholemount_strong.wlz
9839_wholemount_moderate.wlz
9839_wholemount_weak.wlz
9839_wholemount_possible.wlz
9839_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:9839_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50944
Entity Detected:Rps6ka6, ribosomal protein S6 kinase polypeptide 6 ( MGI:1914321)
Sequence:sense strand is shown

>T50944
AGATGAGCCACCACAGGAAGCAGTGGCAGCACCATATTCTGTCTTGGCTCGGAACCCAAACAGGCATCAT
CCAATCCTGGAGCCTGTTACTGCTTCACGTTTAGCTCAGAGGCGGAACATGAAAAAGCGAACATCAACTG
GCTTGTAAGAGTCTTGTGCTCTTCAGTCCTCAGCTAACTGGATGAAGAGAAAATTAAATGTGTGTTGTGG
ATTGGCTTTGTTTTCTTTTTGTCTAATCTCATATCAAAGGTATTTTGTTTCCTGCCACATTACTTGAATA
TTCTGTTTAAGCCTCTTTTGGAGAGGTTGGAATTTTAAATGAACATACATAGGTCCATAATATTCATACT
ATGTCATTGCAGTAGTGTCCAAACGTTTAACTATATAATTGATGTCCACAAGGTCTTAACTTCTCTGCAC
ATTAACTTTCCAAATTCCTTTCAAATAAAGTTAACCTGTTTTTTTATTATTTTACACAAAAATGGTTTAG
GAATTCAGTTAATACTAATCAAGATGCTTTTCATATGTTATAATGATAAATAATATCAGTATTTTAACAT
CATTTCCTAAAAAGGAACTTTTGTTCGTTAAAAGAACAACAGAAGTATTCTAATAGCTTGTGCATAGCCA
AAGCACTCCATTCATTTGAGTCTGTTTAGATACTAAATGTAGTAAAAGTAGTTTGGTGCCTGAGCAAAAT
ACATTCGTGCTAATATATGAATTCCTGATATGGTTGGTGCCAAAGTTTTGATAGATTAATTAAATCACTA
ATAATTTGTGCAGACAGATTTGTATATTATCCATAAGTGACTTCAACTAAAGAAAGGTTCCATACAGCTT
CTAATGTGTTTACAGCTAATAAAATTGTAGTGAAAGTGAAAATGTTTTTATCCAAAGGTTTCATGTTGGT
GTTGTAAGCTCCTAAAAATGTCATAGTTAAGCCTTTGAATATGCACTTCATGGTGTTGATGCGATCTTGG
TG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:AGATGAGCCACCACAGGAAG; Reverse Primer - name:unspecified, sequence:CACCAAGATCGCATCAACAC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:9838 same embryo
 EMAGE:9837 same embryo
 EurExpress:euxassay_018802 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS