EMAGE mouse gene expression spatial database

Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14786

Zeb2 zinc finger E-box binding homeobox 2 ( MGI:1344407)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_005774. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_005774_01	euxassay_005774_02	euxassay_005774_03	euxassay_005774_04

euxassay_005774_05	euxassay_005774_06	euxassay_005774_07	euxassay_005774_08	euxassay_005774_09

euxassay_005774_10	euxassay_005774_11	euxassay_005774_12	euxassay_005774_13	euxassay_005774_14

euxassay_005774_15	euxassay_005774_16	euxassay_005774_17	euxassay_005774_18	euxassay_005774_19

euxassay_005774_20	euxassay_005774_21	euxassay_005774_22	euxassay_005774_23	euxassay_005774_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

14786_wholemount_strong.wlz

14786_wholemount_moderate.wlz

14786_wholemount_weak.wlz

14786_wholemount_possible.wlz

14786_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:14786_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

interdigital region between hindlimb digits 1 and 2

moderate

regional

moderate expression: see section 21 weak expression: see section 09 22

interdigital region between hindlimb digits 2 and 3

moderate

regional

moderate expression: see section 21 weak expression: see section 09 22

interdigital region between hindlimb digits 3 and 4

moderate

regional

moderate expression: see section 21 weak expression: see section 09 22

interdigital region between hindlimb digits 4 and 5

moderate

regional

moderate expression: see section 21 weak expression: see section 09 22

cerebral cortex mantle layer

strong

regional

strong expression: see section 04 15 16 17 moderate expression: see section 05 06 08 09 12 13 14 18 19 20 21 weak expression: see section 01 02 03 07 10 11

medulla oblongata basal plate mantle layer

weak

regional

weak expression: see section 08 14 15

midbrain mantle layer

weak

regional

weak expression: see section 08 12 13 15 16

dorsal grey horn

moderate

regional

moderate expression: see section 13 weak expression: see section 08 09 10 11 12

pharyngo-tympanic tube

moderate

regional

moderate expression: see section 04 weak expression: see section 05 19 20

nasal septum

moderate

regional

moderate expression: see section 09 10 13 14 17 18 weak expression: see section 08 11 15 19

stomach

moderate

regional

moderate expression: see section 04 05 weak expression: see section 01 02 03 06 07 08 09

midgut

moderate

regional

moderate expression: see section 17 weak expression: see section 13 14 15 16 18

lower lip

moderate

regional

moderate expression: see section 12 13 weak expression: see section 07 08 09 10 11 14 15 16 17 18 19 20

upper lip

moderate

regional

moderate expression: see section 12 13 weak expression: see section 08 09 10 11 15 16 17 18

bladder

weak

regional

weak expression: see section 12 13 14

metanephros

weak

regional

weak expression: see section 06 07 08 15 16 17

genital tubercle of male

weak

regional

weak expression: see section 11 12 13 14 15

lung

moderate

regional

moderate expression: see section 12 13 16 weak expression: see section 02 03 04 05 06 07 08 09 14 15 17 18 19 20 21

Annotation Validation:

spatial mapping by EMAGE editor, text annotation by author

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T8793
Entity Detected:	Zeb2, zinc finger E-box binding homeobox 2 ( MGI:1344407)
Sequence:	sense strand is shown >T8793 GCCGAAAAGAGATCAGTTCTAACCTGCTCGGCAGGAATAACGGTCCTGCCTCCAGACACTCTTGGCGAGG TTTTGTTCAGTTTGCTCCGGGAGCTGTTTCTTCGCCTCCACCTTTTTCTCCCCCACACTTCGCGGCTTCT TCATGCTTTTTCTTCTCACCATTTCTGGCCAAAACTACAAACAAGACTTCACAGATCGAGCCTGCGTGCT GCCGAAGCAGGGCGCCGAGTCCATGCGAACTGCCATCTGATCCGCTCTTATCAATGAAGCAGCCGATCAT GGCGGATGGCCCCCGGTGCAAGAGGCGCAAACAAGCCAATCCCAGGAGGAAAAACGTGGTGAACTATGAC AACGTAGTGGACGCAGGCTCGGAGACAGATGAAGAGGACAAGCTTCACATTGCTGAAGATGATAGCCTTG CAAACCCTCTGGACCAGGACACCAGCCCAGCTAGCATGCCCAACCATGAGTCCTCCCCACACATGAGCCA AGGGCTGCTACCAAGAGAGGAAGAAGAGGAGGAGCTAAGGGAGAGTGTTGTGGAGCACAGCTGGCACAGT GGCGAGATTCTGCAAGCCTCTGTAGCCGGTCCAGAAGAAATGAAGGAAGATTATGATGCAATGGGGCCAG AAGCCACGATCCAGACCACAATTAACAATGGTACAGTTAAGAATGCAAATTGCACATCAGACTTTGAGGA ATACTTTGCCAAAAGAAAACTGGAGGAAAGAGATGGCCACGCAGTGAGCATCGAAGAGTACCTTCAGCGA AGCGACACGGCCATTATTTACCCAGAAGCCCCTGAGGAGCTGTCTCGCCTTGGCACGCCAGAGGCCAACG GGCAAGAAGAAAATGACCTGCCACCTGGAACTCCAGATGCTTTTGCCCAACTGCTGACCTGCCCCTACTG CGACCGCGGCTACAAGCGCTTGACATCGCTGAAGGAGCACATCAAGTACCGCCACGAGAAGAATGAAGAG AACTTTTCCTGCCCTCTTTGTAGCTACACGTTCGCCTACCGCACCCAGCTCGAGAGGCATATGGTGACGC ACAAGCCAGGGACAGATCAGCACCAAATGCTAACCCAAGGAGCAGGTAACCGCAAGTTCAAGTGCACGGA GTGTGGCAAGGCCTTCAAGTACAAGCACCACCTGAAAGAACACCTGAGAATTCACAGTGGTGAAAAACCT TACGAATGCCCAAACTGCAAGAAACGCTTCTCTCATTCTGGGTCCTACAGTTCACATATCAGCAGCAAGA AATGTATTGGTTTAATATCAGTAAATGGCCGAATGAGAAACAATATCAAGACGGGTTCTTCCCCTAATTC TGTTTCTTCTTCTCCTACTAACTCAGCCATTACTCAGTTAAGGAACAAGTTGGAAAATGGAAAACCACTT AGCATGTCTGAGCAGACAGGCTTACTTAAGATTAAAACAGAACCACTAGACTTCAATGACTATAAAGTTC TTATGGCAACACATGGGTTTAGTGGCAGCAGTCCCTTTATGAACGGTGGGCTTGGAGCCACCAGCCCTTT AGGTGTACACCCATCTGCTCAGAGTCCAATGCAGCACTTAGGTGTAGGGATGGAAGCCCCTTTACTTGGA TTTCCCACTATGAATAGTAACTTGAGTGAGGTACAAAAGGTTCTACAGATTGTGGACAATACGGTTTCTA GGCAAAAGATGGACTGCAAGACGGAAGACATTTCAAAGTTGAAAGGTTATCACATGAAGGATCCATGTTC TCAGCCAGAAGAACAAGGGGTAACTTCTCCCAATATTCCCCCTGTCGGTCTTCCAGTAGTGAGTCATAAC GGTGCCACTAAAAGTATTATTGACTATACCTTAGAGAAAGTCAATGAAGCCAAAGCTTGCCTCCAGAGCT TGACCACCGACTCAAGGAGACAGATCAGTAACATAAAGAAAGAGAAGTTGCGTACTTTGATAGATTTGGT CACTGATGATAAAATGATTGAGAACCACAGCATATCCACTCCATTTTCATGCCAGTTCTGTAAAGAAAGC TTCCCGGGCCCTATTCCCCTGCATCAGCATGAACGATACCTGTGTAAGATGAATGAAGAGATCAAGGCAG TCCTGCAACCTCATGAAAACATAGTCCCCAACAAAGCTGGAGTTTTTGTTGATAATAAAGCCCTCCTCTT GTCATCTGTACTTTCCGAGAAAGGACTGACAAGCCCCATCAACCCATACAAGGACCACATGTCTGTACTG AAAGCATACTATGCTATGAACATGGAGCCCAACTCTGATGAACTGCTGAAAATCTCCATTGCTGTGGGCC TTCCTCAGGAATTTGTGAAGGAATGGTTTGAGCAAAGAAAAGTCTACCAGTATTCGAATTCCAGGTCACC ATCACTGGAAAGGACCTCCAAGCCGTTAGCTCCCAACAGTAACCCCACCACAAAAGACTCTTTGTTACCC AGGTCTCCTGTAAAACCTATGGACTCCATCACATCGCCATCTATAGCAGAACTCCACAACAGTGTTACGA GTTGTGATCCTCCTCTCAGGCTAACAAAATCTTCCCATTTCACCAATATTAAAGCAGTTGATAAACTGGA CCACTCGAGGAGTAATACTCCTTCTCCTTTAAATCTTTCCTCCACATCTTCTAAAAACTCCCACAGTAGC TCGTACACTCCAAATAGCTTCTCTTCCGAGGAGCTGCAGGCTGAGCCGTTGGACCTGTCATTACCAAAAC AAATGAGAGAACCCAAAGGTATTATAGCCACAAAGAACAAAACAAAAGCTACTAGCATAAACTTAGACCA CAACAGTGTTTCTTCATCGTCTGAGAATTCAGATGAGCCTCTGAATTTGACTTTTATCAAGAAAGAGTTT TCAAATTCTAATAACCTGGACAATAAAAGCAACAACCCTGTGTTCGGCATGAACCCATTTAGTGCCAAGC CTTTATACACCCCTCTTCCACCACAGAGCGCATTTCCCCCTGCCACTTTCATGCCACCAGTCCAGACCAG CATCCCCGGGCTACGACCATACCCAGGACTGGATCAGATGAGCTTCCTACCGCATATGGCCTATACCTAC CCAACGGGAGCAGCTACCTTTGCTGATATGCAGCAAAGGAGGAAATACCAGAGGAAACAAGGATTTCAGG GAGACTTGCTGGATGGAGCACAAGACTACATGTCAGGCCTAGATGACATGACAGACTCCGATTCCTGTCT GTCTCGAAAGAAGATAAAGAAGACAGAAAGTGGCATGTATGCATGTGACTTATGTGACAAGACATTCCAG AAAAGCAGTTCCCTTCTGCGACATAAATACGAACACACAGGAAAGAGACCACACCAGTGTCAGATTTGTA AGAAAGCGTTCAAACACAAACACCACCTTATCGAGCACTCGAGGCTGCACTCGGGCGAGAAGCCCTATCA GTGTGACAAATGTGGCAAGCGCTTCTCACACTCGGGCTCCTACTCGCAGCACATGAATCACAGGTACTCC TACTGCAAGCGGGAGGCGGAGGAGCGGGAAGCAGCCGAGCGCGAGGCGCGAGAGAAAGGGCACTTGGAAC CCACCGAGCTGCTGATGAACCGGGCTTACCTGCAGAGCATCACCCCTCAGGGGTACTCTGACTCGGAGGA GAGGGAGAGCATGCCGAGGGATGGCGAGAGCGAGAAGGAGCACGAGAAGGAGGGCGAGGAGGGTTATGGG AAGCTGCGGAGAAGGGACGGCGACGAGGAGGAAGAGGAGGAAGAGGAAGAAAGTGAAAATAAAAGTATGG ATACGGATCCCGAAACGATACGGGATGAGGAAGAGACTGGGGATCACTCGATGGACGACAGTTCAGAGGA TGGGAAAATGGAAACCAAATCAGACCACGAGGAAGACAATATGGAAGATGGCATGGAATAAACTACTGCA TTTTAAGCTTCCTATTTTTTTTTTCCAGTAGTATTGTTACCTGCTTGAAAACACTGCTGTGTTAAGCTGT TCATGCACGTGCCTGACGCTTCCAGGAAGCTGTAGAGAGGGACAGAAGGGGCAGTTCAGCCAAGACAGAG TTAGATGGAGTTGGATATTGTTTAAAAAAAAAAAAACTGCATTATGCAAAAATTTTGTACAGTGTTAAGG CCTAAAAACTGTGTGGTTCAGAGACTAATTCCTGTGTTTAATAGCATTTATACTTTAAGCACAACTAGAA AATTCTAAGAATTGCACTCTACGTATGTATCACTACAAACTTAAAAAAAATTATGTCTAATTTATATTAA TACATTTTAAAAGGTGCCCGCACTACCATACATCAGTATTTTATTATTATTATTATTGTTATTCCTGTTT AATTTAATGTGCCCGCACTACAGTGCATCAGTATTACGATTCCTCAACACTTTCCTTTCGCTATTCATGA ATTTCCCATTGTTTTACAGCCTAAGTAACCACACACTTTTAGGCCTCAATTTTTTATTTTTTATTTTTTT CTGTGAAGGAACTTGAAGTGATGCATGTGTGAATTTAAGATACCGAAGTCTTAAAGTGACCTGGATGTGA AGGAAAAAGTAAGATGAGAAGTAAAGAAAGCCTTTGTAAGGTGGTTTTAAAAGCCTTATGCAAACCTTTT AATCTGTGTCTCTGCAAGTGCCATCCTTGTACAGTGTTCAGAGGGTAACGAGGGTTACCTTTGCACCAGC TTCAGTGTTAAGCTCACCGTGTTCTTTGAAGCACCCGTGTCAGTATTAGACGACTAGGCAGCAGTTCCTT AGTTTACATATGTTTGTGCAATTATTTTCTGTACTTTTTTGTTCATTAATTTTGTCAGTATTACACCAAA CTTTTTTTGCAACAAAAAAAAATTTTTTTTTGCATTCATTTAATTTTAGGTCAAATAACATTTTATTTAT GTGGCTCATTTTATATTTCCTAATTTTATTTATTTCATACTGTAGTGTACAGTATTATAGTTCTTCAATA TATAGATATATTTTAGTAAAAAAGGAACATGACGTTGATCATTTGGGCAAATTTTACGTAAAGAGAAGAG CATTTATTGTGTTTTGGAACATTAATTGTGAGATGGGATTTTTCAATTTTATTATTTTATTTTTGTTTTT GTTTTTCCAATTACTGGAGATTCCAAATTTGGAAACTTTTGATACAATCTTGTGAAAACACTGTATTTTC GACTGAAAATTCCACTTTCTTCATCTTGTTTTTTAGCTAACCTCAAGAGGGACTGTTAAATACAATGTAT GATACCATGACAAAAATCTTTCCTGAATTGTCTTTGTAAAAGTATTATTGAATTTTCAATTTGTAATTTC TTTTGAAAATGACCATGCTCGAATAAAAATGTAGCCAAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:6408845 using vector (pYX-Asc) specific primers. Forward Primer - name:RZPD T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6408845 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:14782 same embryo
	EMAGE:14783 same embryo
	EMAGE:14787 same embryo
	EMAGE:14785 same embryo
	EMAGE:14784 same embryo
	EurExpress:euxassay_005774 same experiment
	MGI:4829285 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source