EMAGE mouse gene expression spatial database

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EMAGE:18966

Disp1 dispatched homolog 1 (Drosophila) ( MGI:1916147)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


"Pseudo-wholemount" of euxassay_015897. This image has been made by aligning and collapsing the constitutent sections. Information about the method.	euxassay_015897_01	euxassay_015897_02	euxassay_015897_03	euxassay_015897_04

euxassay_015897_05	euxassay_015897_06	euxassay_015897_07	euxassay_015897_08	euxassay_015897_09

euxassay_015897_10	euxassay_015897_11	euxassay_015897_12	euxassay_015897_13	euxassay_015897_14

euxassay_015897_15	euxassay_015897_16	euxassay_015897_17	euxassay_015897_18	euxassay_015897_19

euxassay_015897_20	euxassay_015897_21	euxassay_015897_22	euxassay_015897_23	euxassay_015897_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

18966_wholemount_strong.wlz

18966_wholemount_moderate.wlz

18966_wholemount_weak.wlz

18966_wholemount_possible.wlz

18966_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:18966_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

hindlimb digit 1 phalanx

weak

regional

weak expression: see section 03

hindlimb digit 2 phalanx

weak

regional

weak expression: see section 01 02 03 20

hindlimb digit 3 phalanx

weak

regional

weak expression: see section 01 02 19 20

hindlimb digit 4 phalanx

weak

regional

weak expression: see section 01 18 19 20

hindlimb digit 5 phalanx

weak

regional

weak expression: see section 18

Annotation Validation:

spatial mapping by EMAGE editor, text annotation by author

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T63298
Entity Detected:	Disp1, dispatched homolog 1 (Drosophila) ( MGI:1916147)
Sequence:	sense strand is shown >T63298 AGGCAAGGTCATCTTCTCTCTGAGCCGTATGGGCTCTGCGATCGCCATGGCTGCACTGACCACCTTCGTG GCGGGGGCCATGATGATGCCCTCCACGGTCCTGGCTTACACGCAGCTGGGCACGTTCATGATGCTCGTCA TGTGCGTGAGCTGGGCCTTCGCCACCTTCTTCTTCCAGTGCCTGTGTCGGTGCCTGGGGCCACAAGGCAC CTGCGGCCAGATCCCTTTCCCTACAAAACTCCAGTGCAGTCCCTTTTCCCACACCTTGTCTGCAAGGCCT GGGGACAGGGGACCAAGCAAAACACATGCCGCCAGTGCGTACAGCGTAGATGCCAGGGGCCAGAAATCCC AACTGGAACATGAGTTTTACGAGTTACAGCCCCTGGCATCTCACAGCTGCACTTCCTCGGAGAAGACTAC GTACGAAGAGCCACACACCTGCTCCGAATTTTTCAACGGCCAAGCAAAGAATTTAAGGATGCCTGTGCCT GCAGCCTACAGCAGCGAACTCACCAAAAGCCCCAGCAGTGAGCCAGGCTCAGCCTTGCTGCAGTCCTGTC TGGAGCAGGACACCGTGTGCCATTTCTCTCTCAATCCGAGATGTAAC
Notes:	The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 91301. Forward Primer - name:091301_F_cDNA_Disp1, sequence:AGGCAAGGTCATCTTCTCTCTG; Reverse Primer - name:091301_N_SP6_cDNA_Disp1, sequence:GTTACATCTCGGATTGAGAGAGA. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:18965 same embryo
	EMAGE:18964 same embryo
	EMAGE:18968 same embryo
	EMAGE:18967 same embryo
	EMAGE:18963 same embryo
	EurExpress:euxassay_015897 same experiment
	MGI:4824313 same experiment
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source