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EMAGE:3455

Cdx1 caudal type homeobox 1 ( MGI:88360)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3455 EMAGE:3455
Figure 5F of Ikeya & Takada, 2001 [PMID:11335109] . Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00338-0] Mech Dev 103: 27-33, Ikeya M; Takada S, Wnt-3a is required for somite specification along the anteroposterior axis of the mouse embryo and for regulation of cdx-1 expression. Copyright 2001. Figure 5G of Ikeya & Takada, 2001 [PMID:11335109] . Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00338-0] Mech Dev 103: 27-33, Ikeya M; Takada S, Wnt-3a is required for somite specification along the anteroposterior axis of the mouse embryo and for regulation of cdx-1 expression. Copyright 2001.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Yellow arrow indicates where elevated expression is evident in the tailbud compared to a Wnt-3a<vt/vt> embryo. Figure 5G is higher magnification of the tailbud region of 5F.
Expression Pattern Description
Spatial Annotation:
EMAGE:3455Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3455_wholemount_strong_3D_1.wlz
3455_wholemount_moderate_3D_1.wlz
3455_wholemount_weak_3D_1.wlz
3455_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3455_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
tail
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2676415
Entity Detected:Cdx1, caudal type homeobox 1 ( MGI:88360)
Notes:The Cdx1 probe used in this study by Ikeya & Takada, 2001 [PMID:11335109] was "was kindly provided by Dr P. Gruss" and is of undefined sequence.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Ikeya M & Takada S, 2001 [PMID:11335109] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(01)00338-0] [ PMID:11335109] Ikeya M, Takada S 2001 Wnt-3a is required for somite specification along the anteroposterior axis of the mouse embryo and for regulation of cdx-1 expression. Mech Dev (103):27-33
Links:MGI:3610380 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI