EMAGE mouse gene expression spatial database

EMAGE:3474

Gbx2 gastrulation brain homeobox 2 ( MGI:95668)
TS11 (7.7 dpc)
in situ hybridisation

Data Images


Fig2E.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00056-5] Gene Expr Patterns 3: 497-501, Acampora D; Annino A; Puelles E; Alfano I; Tuorto F; Simeone A, OTX1 compensates for OTX2 requirement in regionalisation of anterior neuroectoderm. Copyright 2003

Expression pattern clarity:
Find spatially similar expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

3D mapping

spatial mapping

View mapped 3D expression image

Download individual expression domains:

Download all expression domains:

Find spatially similar expression patterns:

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

embryo

detected

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	MGI:1321259
Entity Detected:	Gbx2, gastrulation brain homeobox 2 ( MGI:95668)
Sequence:	sense strand is shown >MGI:1321259 CCGTCGCTGATGATGATGCAGCGCCCGCTGGGGAGTAGTACCGCCTTCAGCATAGACTCGCTGATCGGCA GCCCGCCGCAGCCCAGTCCCGGCCATTTCGTCTACACCGGCTACCCCATGTTCATGCCCTACCGGCCGGT GGTGCTGCCGCCACCGCCGCCACCGCCTCCCGCGCTGCCCCAGGCAGCGCTGCAGCCCGCTCTGCCGCCC GCGCACCCTCACCACCAGATCCCCAGCCTGCCCACCGGCTTCTGCTCCAGCCTGGCGCAGGGCATGGCGC TCACCTCCACGCTCATGGCCACTCTGCCCGGCGGCTTCTCTGCGTCGCCCCAGCACCAAGAGGCGGCGGC TGCCCGCAAGTTCGCTCCACAGCCACTGCCCGGAGGCGGCAACTTCGACAAAGCCGAGGCGCTCCAAGCG GATGCGGAAGACGGCAAAGCCTTCTTGGCCAAGGAGGGCTCGCTGCTCGCTTTCTCTGCGGCCGAAGCGG TGCAGGCGTCGCTCGTCGGGGCTGTCCGAGGGCAAGGGAAAGACGAGTCAAAGGTGGAAGATGACCCGAA GGGCAAGGAGGAGAGCTTCTCTCTGGAGAGCGATGTGGATTACAGCTCAGATGACAATTTGCCTGGTCAG ACTGCTCATAAGGAAGAAGACCCCGGCCACGCACTGGAGGAGACCCCGCAGAGCGGCGGTGCAGCAGGCA GCACCACGTCCACAGGCAAGAACCGGCGGCGGCGGACTGCCTTCACCAGCGAACAGCTGCTGGAGCTGGA GAAAGAATTCCACTGCAAAAAGTACCTCTCCCTGACCGAGCGCTCACAGATCGCCCACGCCCTCAAACTC AGCGAGGTGCAAGTAAAAATCTGG
	nt 441 - nt 1304 of NM_010262.1
Notes:	The Gbx2 probe used in this study by Acampora et al., 2003 [PMID:12915318] is indicated as that originally described in Acampora et al., 1998 [PMID:9811592] as a "PCR fragment including the region between aa 6 and aa 294". Editor's note: the co-ordinates shown above were deduced from this information.
Chemistry:	RNA
Strand:	antisense

Specimen

Procedures

General Information

Authors:	Acampora D; Annino A; Puelles E; Alfano I; Tuorto F; Simeone A, 2003 [PMID:12915318] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1016/S1567-133X(03)00056-5] [ PMID:12915318] Acampora D, Annino A, Puelles E, Alfano I, Tuorto F, Simeone A 2003 OTX1 compensates for OTX2 requirement in regionalisation of anterior neuroectoderm. Gene Expr Patterns (3):497-501
	[ PMID:9811592] Acampora D, Avantaggiato V, Tuorto F, Briata P, Corte G, Simeone A 1998 Visceral endoderm-restricted translation of Otx1 mediates recovery of Otx2 requirements for specification of anterior neural plate and normal gastrulation. Development (125):5091-104
	[ doi:10.1006/geno.1997.4969] [ PMID:9417909] Chapman G, Remiszewski JL, Webb GC, Schulz TC, Bottema CD, Rathjen PD 1997 The mouse homeobox gene, Gbx2: genomic organization and expression in pluripotent cells in vitro and in vivo. Genomics (46):223-33
Links:	MGI:3045231 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source