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EMAGE:3533

Pax6 paired box gene 6 ( MGI:97490)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:3533
Fig2J.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00587-1] Mech Dev 110: 241-4, Ohtoshi A; Nishijima I; Justice MJ; Behringer RR, Dmbx1, a novel evolutionarily conserved paired-like homeobox gene expressed in the brain of mouse embryos. Copyright 2002.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Red and green arrowheads indicate the forebrain/midbrain and midbrain/hindbrain junctions, respectively.
Expression Pattern Description
Spatial Annotation:
EMAGE:3533Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3533_wholemount_strong_3D_1.wlz
3533_wholemount_moderate_3D_1.wlz
3533_wholemount_weak_3D_1.wlz
3533_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3533_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future forebrain
detected detected
regionalExpression is dorsal.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3040101
Entity Detected:Pax6, paired box gene 6 ( MGI:97490)
Notes:The Pax6 probe used in this study by Ohtoshi et al., 2002 [PMID:11744391] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Ohtoshi A; Nishijima I; Justice MJ; Behringer RR, 2002 [PMID:11744391] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1074/jbc.M108578200] [ PMID:11741941] Pfisterer P, Ehlermann J, Hegen M, Schorle H 2002 A subtractive gene expression screen suggests a role of transcription factor AP-2 alpha in control of proliferation and differentiation. J Biol Chem (277):6637-44
Links:MGI:3040104 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI