Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:3585

Pou5f1 POU domain, class 5, transcription factor 1 ( MGI:101893)
TS12 (8.0 dpc)
in situ hybridisation

Data Images
EMAGE:3585 EMAGE:3585 EMAGE:3585 EMAGE:3585
Fig1D.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00367-7] Mech Dev 104: 61-7, Chang H; Matzuk MM, Smad5 is required for mouse primordial germ cell development. Copyright 2001 Fig1A.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00367-7] Mech Dev 104: 61-7, Chang H; Matzuk MM, Smad5 is required for mouse primordial germ cell development. Copyright 2001 Fig1B.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00367-7] Mech Dev 104: 61-7, Chang H; Matzuk MM, Smad5 is required for mouse primordial germ cell development. Copyright 2001 Fig1C.Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(01)00367-7] Mech Dev 104: 61-7, Chang H; Matzuk MM, Smad5 is required for mouse primordial germ cell development. Copyright 2001

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Image annotations: The arrows indicate primordial germ cells. the approximate section plane of D is indicated in B
Expression Pattern Description
Spatial Annotation:
EMAGE:3585EMAGE:3585Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3585_voxel_strong_3D_1.wlz
3585_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3585_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
primordial germ cell
detected detected
single cell
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2183916
Entity Detected:Pou5f1, POU domain, class 5, transcription factor 1 ( MGI:101893)
Notes:The Pou5f1 (Oct4) probe used in this study by Chang & Matzuk (2001) [PMID:11404080] is of undefined identity, however it was obtained from Dr Richard Behringer.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:involves: 129S7/SvEvBrd * C57BL/6
Age:8.0 dpc
Theiler Stage:TS12
Mutations:none (wild-type)
Preparation:sectioned wholemount
Procedures
General Information
Authors:Chang H; Matzuk MM (2001) [PMID:11404080] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(01)00367-7] [ PMID:11404080] Chang H, Matzuk MM 2001 Smad5 is required for mouse primordial germ cell development. Mech Dev (104):61-7
Links:MGI:2183918 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI