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EMAGE:3699

Pitx1 paired-like homeodomain transcription factor 1 ( MGI:107374)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3699
Figure 5C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.mod.2004.02.002] Mech Dev 121: 387-95, Ozeki H; Kurihara Y; Tonami K; Watatani S; Kurihara H, Endothelin-1 regulates the dorsoventral branchial arch patterning in mice. Copyright 2004.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: mx, maxillary arch; md, mandibular arch; hy, hyoid arch.
Expression Pattern Description
Spatial Annotation:
EMAGE:3699Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3699_wholemount_strong_3D_1.wlz
3699_wholemount_moderate_3D_1.wlz
3699_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3699_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch mandibular component ectoderm
detected detected
1st branchial arch mandibular component mesenchyme
detected detected
1st branchial arch maxillary component ectoderm
detected detected
1st branchial arch maxillary component mesenchyme
detected detected
1st branchial arch maxillary-mandibular groove ectoderm
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3055609
Entity Detected:Pitx1, paired-like homeodomain transcription factor 1 ( MGI:107374)
Notes:The Pitx1 probe used in this study by Ozeki et al., 2004 [PMID:15110048] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Ozeki H; Kurihara Y; Tonami K; Watatani S; Kurihara H, 2004 [PMID:15110048] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.mod.2004.02.002] [ PMID:15110048] Ozeki H, Kurihara Y, Tonami K, Watatani S, Kurihara H 2004 Endothelin-1 regulates the dorsoventral branchial arch patterning in mice. Mech Dev (121):387-95
Links:MGI:3055610 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI