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EMAGE:3756

Arx aristaless related homeobox ( MGI:1097716)
TS16 (10 dpc)
in situ hybridisation

Data Images
EMAGE:3756
Figure 5D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(97)00062-2] Mech Dev 65: 99-109, Miura H; Yanazawa M; Kato K; Kitamura K, Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Copyright 1997.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Note: Midsagittal view. fp, floor plate. Bar: 200 microns.
Expression Pattern Description
Spatial Annotation:
EMAGE:3756EMAGE:3756Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3756_voxel_strong_3D_1.wlz
3756_voxel_moderate_3D_1.wlz
3756_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3756_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
future midbrain floor plate
detected detected
diencephalon roof plate
not detected not detected
homogeneous
rhombomere 01 floor plate
detected detected
rhombomere 02 floor plate
detected detected
rhombomere 03 floor plate
detected detected
rhombomere 04 floor plate
detected detected
rhombomere 05 floor plate
detected detected
rhombomere 06 floor plate
detected detected
rhombomere 07 floor plate
detected detected
rhombomere 08 floor plate
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3037500
Entity Detected:Arx, aristaless related homeobox ( MGI:1097716)
Notes:The Arx probe used in this study by Miura et al., 1997 [PMID:9256348] was described by the authors as "a 975-bp fragment overlapping the homeobox". Editors note: not enough information is supplied to deduce the exact probe sequence.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Age:10 dpc
Theiler Stage:TS16
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:4% paraformaldehyde
Embedding:paraffin
Staining procedure:autoradiography
General Information
Authors:Miura H; Yanazawa M; Kato K; Kitamura K, 1997 [PMID:9256348] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(97)00062-2] [ PMID:9256348] Miura H, Yanazawa M, Kato K, Kitamura K 1997 Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Mech Dev (65):99-109
Links:MGI:3037504 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI