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EMAGE:3881

Pax2 paired box gene 2 ( MGI:97486)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3881
Figure 2M. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00056-5] Gene Expr Patterns 3: 497-501, Acampora D; Annino A; Puelles E; Alfano I; Tuorto F; Simeone A, OTX1 compensates for OTX2 requirement in regionalisation of anterior neuroectoderm. Copyright 2003.

Expression pattern clarity: two stars
Find spatially similar expression patterns: Find spatially similar patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3881EMAGE:3881Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3881_voxel_strong_3D_1.wlz
3881_voxel_moderate_3D_1.wlz
3881_voxel_weak_3D_1.wlz
3881_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3881_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
hindbrain
detected detected
regionalExpression is at the midbrain-hindbrain boundary.
midbrain
detected detected
regionalExpression is at the midbrain-hindbrain boundary.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1098114
Entity Detected:Pax2, paired box gene 2 ( MGI:97486)
Notes:The Pax2 probe used in this study by Acampora et al., 2003 [PMID:12915318] is indicated as that described originally by Avantaggiato et al., 1996 [PMID:8626038] who describe the probe as corresponding to an "RT-PCR amplified product spanning the region between amino acids 325 and 518" of Pax2. Editors note: Pax2 protein (GenBank ID P32114) is in fact 415 aa in length therefore cannot ascertain the region spanned by this probe.
Chemistry:RNA
Strand:antisense
Label:undefined
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:undefined
General Information
Authors:Acampora D; Annino A; Puelles E; Alfano I; Tuorto F; Simeone A, 2003 [PMID:12915318] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00056-5] [ PMID:12915318] Acampora D, Annino A, Puelles E, Alfano I, Tuorto F, Simeone A 2003 OTX1 compensates for OTX2 requirement in regionalisation of anterior neuroectoderm. Gene Expr Patterns (3):497-501
 [ doi:10.1006/dbio.1996.0120] [ PMID:8626038] Avantaggiato V, Acampora D, Tuorto F, Simeone A 1996 Retinoic acid induces stage-specific repatterning of the rostral central nervous system. Dev Biol (175):347-57
Links:MGI:3045234 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI