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EMAGE:3883

Pax3 paired box gene 3 ( MGI:97487)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:3883
Figure 5E. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00144-3] Gene Expr Patterns 4: 105-10, Schmidtmer J; Engelkamp D, Isolation and expression pattern of three mouse homologues of chick Rgm. Copyright 2004.

Expression pattern clarity: two stars
Find spatially similar expression patterns: Find spatially similar patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3883EMAGE:3883Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mappingspatial mapping

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
3883_voxel_strong_3D_1.wlz
3883_voxel_moderate_3D_1.wlz
3883_voxel_weak_3D_1.wlz
3883_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3883_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
trunk somite
detected detected
regionalExpression in dermomyotomes and is in the hypaxial muscle cell migration at the forelimb level.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3028343
Entity Detected:Pax3, paired box gene 3 ( MGI:97487)
Sequence:sense strand is shown

>MGI:3028343
AGGAGGCGGATCTAGAAAGGAAGGAAGCAGAAGAAAGCGAGAAAAAGGCTAAACACAGCATCGATGGCAT
CCTGAGTGAGCGAGCCTCTGCACCTCAGTCAGATGAAGGCTCCGATATTGACTCTGAACCTGATTTACCG
CTGAAGAGGAAGCAGCGCAGGAGCAGAACCACCTTCACGGCAGAGCAGCTGGAGGAACTGGAGCGGGCTT
TCGAGAGAACCCACTACCCAGACATTTACACCAGGGAGGAGCTGGCCCAGAGGGCGAAGCTTACCGAGGC
CCGAGTGCAGGTCTGGTTTAGCAACCGCCGTGCAAGATGGAGGAAACAAGCTGGAGCCAATCAACTGATG
GCTTTCAACCATCTCATTCCGGGGGGATTCCCTCCCACCGCCATGCCGACCCTGCCAACATACCAGCTGT
CGGAGCACTCTTACCAGCCCACGTCTATTCCACAAGCCGTGTCAGATCCCAGTAGCACCGTCCACAGACC
TCAGCCGCTTCCTCCGAGCACTGTACACCAAAGCACTATTCCTTCGAACGCAGACAGCAGCTCTGCCTAC
TGCCTCCCCAGCACCAGGCATGGATTTTCAAGCTATACAGACAGCTTTGTGCCTCCATCGGGGCCCTCCA
ACCCCATGAACCCCACCATCGGCAATGGCCTTTCACCTCAGGTAATGGGACTTCTGACCAACCACGGTGG
GGTACCGCACCAGCCTCAGACCGACTATGCTCTCTCCCCTCTCACTGGGGGCCTGGAACCCACGACCACG
GTGTCAGCCAGCTGCAGTCAGAGACTGGAACATATGAAGAATGTGGACAGTCTGCCCACATCTCAGCCCT
ATTGTCCCCC
nt 800 - nt 1649 of X59358.1
Notes:The Pax 3 probe used in this study by Schmidtmer & Engelkamp, 2004 [PMID:14678836] is described as covering "bp 800 to 1649 of X59358".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:section
Procedures
General Information
Authors:Schmidtmer J & Engelkamp D, 2004 [PMID:14678836] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00144-3] [ PMID:14678836] Schmidtmer J, Engelkamp D 2004 Isolation and expression pattern of three mouse homologues of chick Rgm. Gene Expr Patterns (4):105-10
Links:MGI:3028345 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI