Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:3993

Hoxd11 homeobox D11 ( MGI:96203)
TS14 (14 Somite no.)
in situ hybridisation

Data Images
EMAGE:3993
Fig5C. Copyright: Reprinted with permission from Elsevier from [doi:10.1006/dbio.2000.9791] Dev Biol 224: 238-49, Bel-Vialar S; Core N; Terranova R; Goudot V; Boned A; Djabali M, Altered retinoic acid sensitivity and temporal expression of Hox genes in polycomb-M33-deficient mice. Copyright 2000

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:3993Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
3993_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:3993_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
tail bud
not detected not detected
homogeneous
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1349369
Entity Detected:Hoxd11, homeobox D11 ( MGI:96203)
Notes:The Hoxd11 probe used in this study by Bel-Vialar et al., 2000 [PMID:10926763] is described as "a 300-bp BamHI-HindIII fragment containing the Hbox and part of the 3' - untranslated region from P.Dolle." Editors Note: There are no BamHI or HindIII sites in the Hoxd11 cDNA RefSeq NM_008273.1 therefore these restriction enzyme sites are presumed to be linker derived. The probe sequence cannot be defined using this information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:BALB/c
Age:14 Somite no.
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Bel-Vialar S; Core N; Terranova R; Goudot V; Boned A; Djabali M, 2000 [PMID:10926763] , Indexed by GXD, Spatially Mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1006/dbio.2000.9791] [ PMID:10926763] Bel-Vialar S, Core N, Terranova R, Goudot V, Boned A, Djabali M 2000 Altered retinoic acid sensitivity and temporal expression of Hox genes in polycomb-M33-deficient mice. Dev Biol (224):238-49
Links:MGI:1889605 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI