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EMAGE:4133

Cyp26c1 cytochrome P450, family 26, subfamily c, polypeptide 1 ( MGI:2679699)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:4133 EMAGE:4133
Figure 3A. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00066-8] Gene Expr Patterns 3: 449-54, Tahayato A; Dolle P; Petkovich M, Cyp26C1 encodes a novel retinoic acid-metabolizing enzyme expressed in the hindbrain, inner ear, first branchial arch and tooth buds during murine development. Copyright 2003. Figure 3B. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S1567-133X(03)00066-8] Gene Expr Patterns 3: 449-54, Tahayato A; Dolle P; Petkovich M, Cyp26C1 encodes a novel retinoic acid-metabolizing enzyme expressed in the hindbrain, inner ear, first branchial arch and tooth buds during murine development. Copyright 2003.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: Otic vesicle (arrows) and lateral epibranchial placodes (arrowheads). Cervical mesenchyme (dashed box), the pontine flexure (arrows) and the maxillary component of the first branchial arch (arrowhead) (H,I). (A) Lateral view, (B) Dorsal view, ba1, first branchial arch; md, mandibular component of the first branchial arch; mx, maxillary component of the first branchial arch; ov, otic vesicle.
Expression Pattern Description
Spatial Annotation:
EMAGE:4133Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4133_wholemount_strong_3D_1.wlz
4133_wholemount_moderate_3D_1.wlz
4133_wholemount_possible_3D_1.wlz
4133_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4133_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch mandibular component
detected detected
1st branchial arch maxillary component
detected detected
branchial arch
detected detected
regionalExpression is in the lateral epibranchial placodes.
rhombomere 02
detected detected
head mesenchyme
strong strong
regionalExpression is in the cervical mesenchyme caudal to the otic vesicle.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3026696
Entity Detected:Cyp26c1, cytochrome P450, family 26, subfamily c, polypeptide 1 ( MGI:2679699)
Notes:The Cyp26c1 probe used in this study by Tahayato et al., 2003 [PMID:12915310] "was synthesized from a template plasmid containing CYP26C1 Exon 4 and Exon 5".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Tahayato A; Dolle P; Petkovich M, 2003 [PMID:12915310] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S1567-133X(03)00066-8] [ PMID:12915310] Tahayato A, Dolle P, Petkovich M 2003 Cyp26C1 encodes a novel retinoic acid-metabolizing enzyme expressed in the hindbrain, inner ear, first branchial arch and tooth buds during murine development. Gene Expr Patterns (2003):449-54
Links:MGI:3026698 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI