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EMAGE:4150

Tshz1 teashirt zinc finger family member 1 ( MGI:1346031)
TS17 (11 dpc)
in situ hybridisation

Data Images
EMAGE:4150 EMAGE:4150
Figure 2D. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00318-4] Mech Dev 91: 445-8, Caubit X; Core N; Boned A; Kerridge S; Djabali M; Fasano L, Vertebrate orthologues of the Drosophila region-specific patterning gene teashirt. Copyright 2000. Figure 2C. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/S0925-4773(99)00318-4] Mech Dev 91: 445-8, Caubit X; Core N; Boned A; Kerridge S; Djabali M; Fasano L, Vertebrate orthologues of the Drosophila region-specific patterning gene teashirt. Copyright 2000.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: ba1 and ba2, branchial arch 1 and 2. Arrows indicate the anterior and posterior limits of expression.
Expression Pattern Description
Spatial Annotation:
EMAGE:4150Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4150_wholemount_strong_3D_1.wlz
4150_wholemount_moderate_3D_1.wlz
4150_wholemount_weak_3D_1.wlz
4150_wholemount_possible_3D_1.wlz
4150_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4150_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
detected detected
gradedStronger levels are in the distal mesenchyme.
2nd branchial arch
detected detected
gradedStronger levels are in the distal mesenchyme.
neural tube
detected detected
regionalExpression is in the dorsal neural tube, the anterior boundary regresses posteriorly.
trunk somite
detected detected
regionalThe anterior limit is at the boundary between somite 3/4.
forelimb bud mesenchyme
detected detected
regionalExpression extends distally through the progress zone.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:556295
Entity Detected:Tshz1, teashirt zinc finger family member 1 ( MGI:1346031)
Sequence:sense strand is shown

>MGI:556295
GGCCTCTGCGGGAGGCGAGGACACAGCATCTGCCACACCCGAGACCAGTGGCTTGTTCTTAGACTTGGTC
AGATCAATGGGCTGGTCGCTGTTCTCATAGTAGTAGCGGTCGATTGCATCAGCCTGCTTGGCAGGGGTCG
TGGGGTAGACGGGCTTGTCCAGCATGCTGTTGCTGATCTTGTAGAGCATCGCCAGTGGATCCAGAGAGGG
GCTCACGGGCTTGGACACCTTTCCTAGGTGGGTGTTCATGATGGACTGCAGAGCGCTTAGAGGGTTGATG
AAAGAAGGCTCCGGCGAGTGGTCCGTGATGATACCCAGATGGCCGCAGCCATTGGTGACCTTGGCTTTAA
GAGGTTCTGTACCATTTGGGGTGTGAGCGTCCAATGTACTCTCCTTTTTGGCCTTCCCAGTTTCTGAATC
CGAGCCCTTCTTCTGTGGCTTGCTCCCGGTCTCCTCTGTCTTAGGAAGATCTTTATTCTCCTTTGCCACA
GGAGAGATGGCTTTGACAGGGGAGCTCTTCTCCTTCTCAGTAGGCCTCTCCTCCTTCTTGATGCTGACCT
TGCCCGTGACCTTCTC
Notes:The Tshz1 (mtsh1) probe used in this study by Caubit et al., 2000 [PMID:10704881] was generated from "EST AA589598 (mtsh1)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:11 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Caubit X; Core N; Boned A; Kerridge S; Djabali M; Fasano L, 2000 [PMID:10704881] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/S0925-4773(99)00318-4] [ PMID:10704881] Caubit X, Core N, Boned A, Kerridge S, Djabali M, Fasano L 2000 Vertebrate orthologues of the Drosophila region-specific patterning gene teashirt. Mech Dev (91):445-8
Links:MGI:2677327 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI