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EMAGE:4340

Trp53inp2 transformation related protein 53 inducible nuclear protein 2 ( MGI:1915978)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4340
Figure 3D. Copyright: This image is from Bennetts JS, Dev Dyn 2007 Mar;236(3):843-52 and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright.

Expression pattern clarity: two stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Note: drg, dorsal root ganglion; fb, forebrain; fl, forelimb; fnp, frontonasal prominence; h, heart; hb, hindbrain; hl, hindlimb; mb, midbrain; mn, mandibular prominence; mx, maxillary prominence.
Expression Pattern Description
Spatial Annotation:
EMAGE:4340Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4340_wholemount_strong_3D_1.wlz
4340_wholemount_moderate_3D_1.wlz
4340_wholemount_possible_3D_1.wlz
4340_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4340_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
heart
detected detected
forebrain
detected detected
hindbrain
detected detected
midbrain
detected detected
vagus x ganglion
detected detected
trigeminal v ganglion
detected detected
facial vii ganglion
detected detected
glossopharyngeal ix ganglion
detected detected
otocyst
detected detected
peripheral nerve trunk
detected detected
regionalExpression is in neural processes including the dorsal root ganglia, sympathetic chain ganglia, and spinal nerves in the trunk.
spinal nerve
detected detected
regionalExpression is in neural processes including the dorsal root ganglia, sympathetic chain ganglia, and spinal nerves in the trunk.
dorsal root ganglion
detected detected
regionalExpression is in neural processes including the dorsal root ganglia, sympathetic chain ganglia, and spinal nerves in the trunk.
1st branchial arch mandibular component
detected detected
spotted
1st branchial arch maxillary component
detected detected
spotted
fronto-nasal process
detected detected
spotted
forelimb bud mesenchyme
detected detected
spotted
hindlimb bud mesenchyme
detected detected
spotted
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3702296
Entity Detected:Trp53inp2, transformation related protein 53 inducible nuclear protein 2 ( MGI:1915978)
Sequence:sense strand is shown

>MGI:3702296
CTGCCCTCTTTGATCCTTTCTTACTAGGCTTCATGTGGGATGGGAGAGGATGTCCCCAGGATGGGGACAG
AGGAAGCCCTGCTAGGGTCTCCTAGCCCAGTAAGCCAAATGGGAACTATAAGCAGATCAAAATTTTACAC
TAGCTTATTAGAGCCCTATTAGTTCCTGTCCCAAGTTCTTCAGTTACAACCTAGTAGTATACTTACTCTT
CCAACTGTCCTAAGGTCACTTCCCAGCCAGCTTAGGATCTTCAGCATTTTTAAGAGCTGAAGCTCCCTCT
TGCCCTTCTTGTCTACTCCTCACTGCCAGTTGGGGCCTAGGCTTAGTCCTGGGCAAATGTCCATGATCTT
GCTGCTGTAGGAAGCTTGATAGGGCATTTGGCTCAAATTTCAGAAGGCCTCGCTCCTGACCTAATTTCTC
AAAGCTCCGGTAGTTCTAGACCCCTCCAATTTCTCATCTGGTTGCAAGGCTTATTTTTCTTTTGT
nt 2516 - nt 3000 of NM_178111.3
Notes:The Trp53inp2 probe used in this study by Bennetts et al., 2007 [PMID:17238154] "was synthesized from a plasmid containing 485 bp of 3'UTR sequence (nt 2516-3000; NM_178111)". Editors note: The version of NM_178111 referred to by the authors is most likely to be either NM_178111.2 or NM_178111.3 (which replaced version 2 on Nov 17 2006). Nucleotides 2516-3000 are the same between these two versions.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Bennetts JS; Rendtorff ND; Simpson F; Tranebjaerg L; Wicking C, 2007 [PMID:17238154] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1002/dvdy.21064] [ PMID:17238154] Bennetts JS, Rendtorff ND, Simpson F, Tranebjaerg L, Wicking C 2007 The coding region of TP53INP2, a gene expressed in the developing nervous system, is not altered in a family with autosomal recessive non-progressive infantile ataxia on chromosome 20q11-q13. Dev Dyn (236):843-52
Links:MGI:3702443 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI