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EMAGE:4372

Homez homeodomain leucine zipper-encoding gene ( MGI:2678023)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4372
Figure 4C. Copyright: This image is from Bayarsaihan D, Proc Natl Acad Sci U S A 2003 Sep 2;100(18):10358-63 [PMID:12925734] . Copyright 2003 National Academy of Sciences, U.S.A.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:4372Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4372_wholemount_strong_3D_1.wlz
4372_wholemount_moderate_3D_1.wlz
4372_wholemount_possible_3D_1.wlz
4372_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4372_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
brain
strong strong
eye
strong strong
regionalExpression is in the optic vesicle.
otocyst
strong strong
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3718899
Entity Detected:Homez, homeodomain leucine zipper-encoding gene ( MGI:2678023)
Sequence:sense strand is shown

>MGI:3718899
CTCTTCTCTCTTTCACACAGCAGTCAGTGAGGCCCCCACAGGAGAGGCCTCCAGTGCTCCGTCCGGAGCA
GGTTGCTCTTGGACTGAGTCCTCTGGCGCCTAGTGAGCAGCCCACTCATATGAAAGGATTGAAGGTTGAG
CCTGAGGAGCCCTCTCAGGTATCACAGCTGCCACTGAATCATCAGAACGCTAAGGAGCCTCTGATGATGG
GCAGCAGAACATTCTCCCACCAATCAGACTGTCAGGATCT
nt 536 - nt 785 of NM_183174.1
Notes:The Homez probe template used in this study by Bayarsaihan et al., 2003 [PMID:12925734] was generated by RT-PCR using the following primers: "sense 5'-CTCTTCTCTCTTTCACACAGCA-3' and antisense with the T7 polymerase-binding site 5'- CCAAGCTTCTAATACGACTCACTATAGGGAGATCCTGACAGTCTGATT-3'".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Bayarsaihan D; Enkhmandakh B; Makeyev A; Greally JM; Leckman JF; Ruddle FH, 2003 [PMID:12925734] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1073/pnas.1834010100] [ PMID:12925734] Bayarsaihan D, Enkhmandakh B, Makeyev A, Greally JM, Leckman JF, Ruddle FH 2003 Homez, a homeobox leucine zipper gene specific to the vertebrate lineage. Proc Natl Acad Sci U S A (100):10358-63
Links:MGI:3718909 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI