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EMAGE:4607

Fscn1 fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) ( MGI:1352745)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:4607
Figure 1G. Copyright: Reprinted with permission from Elsevier from [doi:10.1016/j.modgep.2004.04.012] Gene Expr Patterns 4: 637-43, De Arcangelis A; Georges-Labouesse E; Adams JC, Expression of fascin-1, the gene encoding the actin-bundling protein fascin-1, during mouse embryogenesis. Copyright 2004.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotations: forebrain, (fb), the midbrain, (mb), and the hindbrain, (hb), branchial arches, 1 and 2, cranial ganglia V and VII, the optic cup, (op), and the limb buds, (fl, hl).
Expression Pattern Description
Spatial Annotation:
EMAGE:4607Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
4607_wholemount_moderate.wlz
4607_wholemount_weak.wlz
4607_wholemount_notDetected.wlz
4607_wholemount_strong.wlz
(what is wlz format?)
Download all expression domains: EMAGE:4607_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
1st branchial arch
strong strong
2nd branchial arch
strong strong
forelimb bud
strong strong
hindlimb bud
strong strong
trunk somite
strong strong
tail somite
strong strong
forebrain
detected detected
hindbrain
detected detected
midbrain
detected detected
optic cup
detected detected
facial vii ganglion
detected detected
trigeminal v ganglion
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:3526169
Entity Detected:Fscn1, fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) ( MGI:1352745)
Sequence:sense strand is shown

>MGI:3526169
GCTATCCAAGCTCCCGGGGCCACCGGCGCGCTCCGCCACCATGAGCGCCAACGCACGGCAGAGGCTGTGC
AGATTCAGTTCGGGCTCATCAGCTGCGTCAACAAGTAGCTGACAGCCGAGTGCGTTCGGGTTCAAGGTGA
ACGCATCCGCTAGTAGCTTGAAAAAGAAGCAGATCTGGACGCTGGAGCAACCTGCCGATGAGGCGGGCAC
GCGGCCGTGTGTCTTCGCACCACCTGGTTCGCTACCTGGCCGCCTACAAGGTCGGCAACGTGACCTGCGA
GCTCGATGTGCCCGAGGGTGACTGACGCGTGCTCTTGGTTGCGGAGCGAGGGGGGCGCTGGTCGCTGGAG
TCGTGGGCTCACCGTGGGTACGTTGTCGGCATCGCGGAGCGCTGGTTGTGCTTGCGGCAGGGGTGGTCGG
CGGGCGAGATAGTGGAGCGTG
Notes:The Fscn1 (fascin-1) probe used in this study by De Arcangelis et al., 2004 [PMID:15465486] "was a 1300 b fragment of mouse fascin-1 prepared from the mouse fascin-1 clone W89342 in the pT7T3D-Pac vector (IMAGE Consortium clone obtained from Genome Systems, Inc)".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:De Arcangelis A; Georges-Labouesse E; Adams JC, 2004 [PMID:15465486] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ doi:10.1016/j.modgep.2004.04.012] [ PMID:15465486] De Arcangelis A, Georges-Labouesse E, Adams JC 2004 Expression of fascin-1, the gene encoding the actin-bundling protein fascin-1, during mouse embryogenesis. Gene Expr Patterns (4):637-43
Links:MGI:3526174 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI