EMAGE mouse gene expression spatial database

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EMAGE:4752

Nuak2 NUAK family, SNF1-like kinase, 2 ( MGI:1921387)
TS15 (9.5 dpc)
in situ hybridisation

Data Images


Fig 3P of [doi:10.1002/dvdy.20823] Copyright: This image is from Hirano M; Kiyonari H; Inoue A; Furushima K; Murata T; Suda Y; Aizawa S, A new serine/threonine protein kinase, Omphk1, essential to ventral body wall formation. Dev Dyn 2006 Aug;235(8):2229-37 and is displayed with the permission of Wiley-Liss, Inc. who owns the Copyright. [PMID:16715502]

Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

4752_wholemount_moderate_3D_1.wlz

4752_wholemount_weak_3D_1.wlz

4752_wholemount_notDetected_3D_1.wlz

4752_wholemount_strong_3D_1.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:4752_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Text Annotation:

Structure

Level

Pattern

Notes

future forebrain

strong

future midbrain

strong

future hindbrain

weak

future spinal cord

weak

Annotation Validation:

EMAGE Editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	MGI:3771057
Entity Detected:	Nuak2, NUAK family, SNF1-like kinase, 2 ( MGI:1921387)
Sequence:	sense strand is shown >MGI:3771057 GAGTATGCCAGCCGAGGCGATCTGTATGATTACATCAGTGAGCGGCCACGGCTGAGTGAGCGGGACGCCA GGCATTTCTTCCGACAGATCGTGTCTGCCCTGCACTACTGCCACCAGAACGGGATCGTTCACCGAGATCT CAAGCTGGAAAACATCCTTCTAGATGCCAATGGAAACATCAAGATTGCTGACTTTGGCCTCTCCAACCTG TACCACAAAGGCAAGTTCCTCCAGACGTTCTGTGGGAGCCCTCTCTACGCCTCGCCTGAGATAGTCAACG GGAAGCCCTATGTGGGCCCAGAGGTGGACAGCTGGTCTCTGGGCGTTCTCCTGTACATCCTGGTGCATGG CACCATGCCCTTTGACGGGCAGGATCATAAAACACTGGTGAAGCAAATCAGTAACGGGGCTTACCGTGAG CCGCCCAAGCCGTCCGATGCCTGTGGCCTGATCCGGTGGCTGTTAATGGTGAACCCCACCCGTCGGGCCA CACTGGAGGATGTAGCCAGTCATTGGTGGGTCAACTGGGGTTACACCACCGGAGTCGGGGAACAGGAAGC CCTGCGTGAGGGTGGGCACCCTAGTGGTGACTTTGGCCGGGCCTCCATGGCGGACTGGTTACGTCGCTCC TCGCGCCCCCTCCTGGAGAATGGAGCCAAGGTGTGCAGCTTCTTCAAGCAGCACGTGCCGGGAGGTGGAA GCACTGTACCTGGGCTGGAGCGGCAACATTCTCTTAAGAAGTCCCGAAAGGAGAATGACATGGCTCAAAA TCTGCAAGGTGACCCGGCTGAGGATACCTCTTCTCGCCCTGGCAAGAGCAGCCTTAAGCTTCCGAAAGGC ATTCTCAAGAAAAAGTCCTCTACCTCGTCAGGGGAGGTACAGGAGGACCCTCAGGAACTCAGACCGGTGC CTGATACTCCAGGGCAGCCTGTCCCTGCTGTATCCCTGCTCCCAAGGAAAGGCATCCTTAAGAAGTCTCG ACAGCGTGAATCTGGTTACTACTCCTCTCCAGAGCCCAGCGAGTCTGGGGAACTCTTAGACGCCAGTGAT GTGTTTGTGAGTGGGGACCCCGTGGAGCAGAAGTCTCCACAGGCTTCAGGGCTCCTCCTCCACCGCAAGG GCATTCTCAAACTCAATGGCAAGTTCTCCCGCACAGCCTTAGAAGGCACTACCCCTAGCACCTTTGGCTC CCTGGACCAAC
	nt 492 - nt 1692 of NM_028778.2
Notes:	The Nuak2 (Omphk2) probe used in this study by Hirano et al., 2006 [PMID:16715502] was a "1,200-bp fragment, corresponding to the 3'-region of the Omphk2 gene (133-533 amino acids)".
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Age:	9.5 dpc
Theiler Stage:	TS15
Mutations:	none (wild-type)
Preparation:	wholemount

Procedures

General Information

Authors:	Hirano M; Kiyonari H; Inoue A; Furushima K; Murata T; Suda Y; Aizawa S, 2006 [PMID:16715502] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	non-screen
References:	[ doi:10.1002/dvdy.20823] [ PMID:16715502] Hirano M, Kiyonari H, Inoue A, Furushima K, Murata T, Suda Y, Aizawa S 2006 A new serine/threonine protein kinase, Omphk1, essential to ventral body wall formation. Dev Dyn (235):2229-37
Links:	MGI:3771075 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source