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EMAGE:512

Foxa2 forkhead box A2 ( MGI:1347476)
TS10 (6.5 dpc)
in situ hybridisation

Data Images
EMAGE:512
Figure 2E(top) of Norris et al., 2002 [PMID:12091315] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations used in the figure: AVE - anterior primitive streak, AS - anterior primitive streak
Expression Pattern Description
Spatial Annotation:
EMAGE:512Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
512_wholemount_strong_3D_1.wlz
512_wholemount_moderate_3D_1.wlz
512_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:512_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
primitive endoderm
detected detected
regionalExpression is anterior
primitive streak
detected detected
regionalExpression is anterior
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2183458
Entity Detected:Foxa2, forkhead box A2 ( MGI:1347476)
Notes:The Foxa2 (HNF-3beta) probe used in this study by Norris et al., 2002 [PMID:12091315] is indicated as being described by Sasaki & Hogan, 1996 [PMID:9078367] . The latter contains no reference to in situ probes.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:ICR
Age:6.5 dpc
Theiler Stage:TS10
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Norris et al., 2002 [PMID:12091315] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:12091315] Norris DP, Brennan J, Bikoff EK, Robertson EJ 2002 The Foxh1-dependent autoregulatory enhancer controls the level of Nodal signals in the mouse embryo. Development (129):3455-68
 [ doi:10.1046/j.1365-2443.1996.04004.x] [ PMID:9078367] Sasaki H, Hogan BL 1996 Enhancer analysis of the mouse HNF-3 beta gene: regulatory elements for node/notochord and floor plate are independent and consist of multiple sub-elements. Genes Cells (1):59-72
Links:MGI:2183484 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI