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EMAGE:817

Hoxc9 homeobox C9 ( MGI:96199)
TS15 (9.5 dpc)
in situ hybridisation

Data Images
EMAGE:817
Figure 3A of Bel et al., 1998 [PMID:9716520] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviation used: S, somite.
Expression Pattern Description
Spatial Annotation:
EMAGE:817Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
817_wholemount_strong_3D_1.wlz
817_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:817_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
trunk paraxial mesenchyme
detected detected
regionalNormal boundaries for Hoxc9 are s17/16 in the mesoderm and s10/9 in the neural tube.
neural tube
detected detected
regionalNormal boundaries for Hoxc9 are s17/16 in the mesoderm and s10/9 in the neural tube.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1331656
Entity Detected:Hoxc9, homeobox C9 ( MGI:96199)
Notes:The probe used in this study by Bel et al., 1998 [PMID:9716520] was "a 638 bp EcoRI-XhoI fragment containing 3' untranslated sequence and part of the first exon from A. Awgulewitsch".
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:9.5 dpc
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Bel et al., 1998 [PMID:9716520] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9716520] Bel S, Core N, Djabali M, Kieboom K, Van der Lugt N, Alkema MJ, Van Lohuizen M 1998 Genetic interactions and dosage effects of Polycomb group genes in mice. Development (1998):3543-51
Links:MGI:1331667 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI