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EMAGE:818

Hoxc8 homeobox C8 ( MGI:96198)
TS15 (22 Somite no.)
in situ hybridisation

Data Images
EMAGE:818
Figure 1B of van den Akker et al., 2001 [PMID:11311170] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations used: s, somite; FL, forelimb bud.
Expression Pattern Description
Spatial Annotation:
EMAGE:818Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
818_wholemount_strong_3D_1.wlz
818_wholemount_moderate_3D_1.wlz
818_wholemount_weak_3D_1.wlz
818_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:818_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
somite 11
weak weak
Authors state that very low levels of expression can be detected up to somite 11.
somite 12
weak weak
Authors state that very low levels of expression can be detected up to somite 11.
somite 13
weak weak
Authors state that very low levels of expression can be detected up to somite 11.
somite 14
weak weak
somite 15
detected detected
somite 16
detected detected
somite 17
detected detected
somite 18
detected detected
somite 19
detected detected
somite 20
detected detected
somite 21
detected detected
somite 22
detected detected
somite 23
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1331657
Entity Detected:Hoxc8, homeobox C8 ( MGI:96198)
Notes:The probe used in study by van den Akker et al., 2001 [PMID:11311170] is described as a "180 bp AvaI-PstI" fragment. Unable to determine this region by cutting the Hoxc8 cDNA refseq (NM__010466.1).
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:22 Somite no.
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:van den Akker et al., 2001 [PMID:11311170] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11311170] van den Akker E, Fromental-Ramain C, de Graaff W, Le Mouellic H, Brulet P, Chambon P, Deschamps J 2001 Axial skeletal patterning in mice lacking all paralogous group 8 Hox genes. Development (128):1911-21
Links:MGI:1934250 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI