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EMAGE:819

Hoxd8 homeobox D8 ( MGI:96209)
TS15 (26 Somite no.)
in situ hybridisation

Data Images
EMAGE:819
Figure 1C of van den Akker et al., 2001 [PMID:11311170] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Abbreviations used: s, somite; FL, forelimb bud.
Expression Pattern Description
Spatial Annotation:
EMAGE:819Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
819_wholemount_strong_3D_1.wlz
819_wholemount_moderate_3D_1.wlz
819_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:819_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: three stars
Text Annotation:
StructureLevelPatternNotes
somite 11
weak weak
Trace expression.
somite 12
weak weak
Trace expression.
somite 13
weak weak
Trace expression.
somite 20
weak weak
somite 15
weak weak
Trace expression.
somite 16
weak weak
Trace expression.
somite 18
weak weak
somite 19
weak weak
somite 25
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 21
weak weak
somite 22
weak weak
somite 28
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 24
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 14
weak weak
Trace expression.
somite 17
weak weak
Trace expression.
somite 27
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 23
weak weak
somite 29
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 30
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
somite 26
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
tail paraxial mesenchyme
strong strong
Authors state that expression is strong in the paraxial mesoderm posterior to somite 23.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1342074
Entity Detected:Hoxd8, homeobox D8 ( MGI:96209)
Notes:The probe used in study by van den Akker et al., 2001 [PMID:11311170] is described as a "220 bp EcoRI-AvaI" fragment. Unable to determine this region from the current Hoxd8 cDNA Model RefSeq (XM_355338.1).
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:26 Somite no.
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:Umspecified
General Information
Authors:van den Akker et al., 2001 [PMID:11311170] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11311170] van den Akker E, Fromental-Ramain C, de Graaff W, Le Mouellic H, Brulet P, Chambon P, Deschamps J 2001 Axial skeletal patterning in mice lacking all paralogous group 8 Hox genes. Development (128):1911-21
Links:MGI:1934252 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI