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EMAGE:871

Hoxa3 homeobox A3 ( MGI:96175)
TS11 (7.5 dpc)
in situ hybridisation

Data Images
EMAGE:871 EMAGE:871
Figure 2B of Gaunt, 1988 [PMID:2904354] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright. Figure 2B of Gaunt, 1988 [PMID:2904354] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Abbreviations used: A, anterior; P, posterior. The author refers to this embryo as "late" 7.5 dpc.
Expression Pattern Description
Spatial Annotation:
EMAGE:871EMAGE:871Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
871_voxel_strong_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:871_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
embryo ectoderm
detected detected
regionalTranscripts were located in the ectoderm and mesoderm layers of the posterior half of the embryo.
allantois
detected detected
embryo mesoderm
detected detected
regionalTranscripts were located in the ectoderm and mesoderm layers of the posterior half of the embryo.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1328144
Entity Detected:Hoxa3, homeobox A3 ( MGI:96175)
Notes:The Hoxa3 (Hox-1.5, Mo-10) probe used in this study by Gaunt, 1988 [PMID:2904354] is indicated as that originally described by Gaunt et al., 1986 [PMID:2879244] ie. a HindIII-EcoRI genomic subclone of a larger cosmid clone. The probe region is indicated as RNA probe2 in Fig1.
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Strain:(CBA x C57BL/6)F1
Age:7.5 dpc
Theiler Stage:TS11
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Gaunt, 1988 [PMID:2904354] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:2904354] Gaunt SJ 1988 Mouse homeobox gene transcripts occupy different but overlapping domains in embryonic germ layers and organs: a comparison of Hox-3.1 and Hox-1.5. Development (103):135-44
 [ doi:10.1038/324662a0] [ PMID:2879244] Gaunt SJ, Miller JR, Powell DJ, Duboule D 1986 Homoeobox gene expression in mouse embryos varies with position by the primitive streak stage. Nature (324):662-4
Links:MGI:1345061 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI