Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:933

Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 ( MGI:1861722)
TS20 (12.5 dpc)
in situ hybridisation

Data Images
EMAGE:933
Figure 8G of Toresson & Campbell, 2001 [PMID:11731457] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Abbreviations used: LGE, lateral ganglionic eminence; MGE, medial ganglionic eminence.
Expression Pattern Description
Spatial Annotation:
EMAGE:933EMAGE:933Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
933_voxel_strong_3D_1.wlz
933_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:933_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
telencephalon
detected detected
regionalExpression is in the ventromedial LGE.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:657783
Entity Detected:Aldh1a3, aldehyde dehydrogenase family 1, subfamily A3 ( MGI:1861722)
Sequence:sense strand is shown

>MGI:657783
CACCGCCAGGCCAAGCTGGTGCGTCGGGGACACGGACCGGAGAGTGCGAACCAGTTATGGCTACCACCAA
CGGGGCTGTGGAAAACGGACAGCCGGATGGGAAACCGCCTGCCTTGCCGCGCCCCATCCGCAACTTGGAG
GTCAAGTTCACCAAGATATTTATCAACAACGACTGGCACGAATCCAAGAGTGGAAGAAAGTTTGCCACAT
ATAACCCTTCAACACTAGAGAAAATATGTGAGGTGGAAGAAGGAGATAAGCCCGATGTGGACAAGGCTGT
GGAGGCCGCTCAAGCTGCCTTCCAGCGGGGATCCNCCGTGGCGCCGGCTGGATGCACTGAGCAGAGGCCA
GTTGCTGCATCAGCTGGCTGACCTTGTAGAAAGGGACCGAGCGATCCTGGCTACTCTGGAGACCATGGAC
ACCGGCAAGCCATTCCTTCATGCCTTTTTCGTCGACCTGGAAGGCTGTATTAAGACCTTCAGATATTTTG
CCGGGTGGGCAGACCAAATCCAGGGCAGGACCATCCCCACAGATGACAACGTTGTGTGCTTCACCAGGCA
TGAAGCCATCGGGTGTGTGGGGGCATTACACATGGAACTTCCCCCGCTGAAGCTGGCCTGAAACGGGTCC
TGCCTGTGCTGTGGGAACACCGTGTCCTGAAGCAGNTGAGCAGAACC
Notes:The Aldh1a3 (Raldh3) probe used in this study by Toresson & Campbell, 2001 [PMID:11731457] is described as an "EST-clone, GenBank accession no. AA790530; HGMP Resource Centre". This is IMAGE clone 1244095.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:12.5 dpc
Theiler Stage:TS20
Mutations:none (wild-type)
Preparation:section
Procedures
General Information
Authors:Toresson & Campbell, 2001 [PMID:11731457] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:11731457] Toresson H, Campbell K 2001 A role for Gsh1 in the developing striatum and olfactory bulb of Gsh2 mutant mice. Development (128):4769-80
Links:MGI:2154726 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI