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EMAGE:5893

Trappc10 trafficking protein particle complex 10 ( MGI:1336209)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:5893
Figure 138-TMEM1e10.5. [doi:10.1038/nature01178] Reymond A; Marigo V; Yaylaoglu MB; Leoni A; Ucla C; Scamuffa N; Caccioppoli C; Dermitzakis ET; Lyle R; Banfi S; Eichele G; Antonarakis SE; Ballabio A, "Human chromosome 21 gene expression atlas in the mouse." Nature 2002;420: 582-6. [PMID:12466854] © Nature Publishing Group. Reproduced with permission from Nature.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:5893Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
5893_wholemount__possible.wlz
(what is wlz format?)
Download all expression domains: EMAGE:5893_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
branchial arch
detected detected
limb
detected detected
surface ectoderm
detected detected
gut
detected detected
mesonephros
detected detected
brain
detected detected
future spinal cord
detected detected
otocyst
detected detected
eye
detected detected
heart
detected detected
dorsal root ganglion
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2663954
Entity Detected:Trappc10, trafficking protein particle complex 10 ( MGI:1336209)
Sequence:sense strand is shown

>MGI:2663954
GGAGGACTGAGAACGTTTAATACATACAGCATCTATTTACAATCTATGACTTCCACACCAGTAAAAACAA
ACACACATTTATTTTGTCCTTGATTTTTGGTGCACTTATACACAAACATTACATCAGTTAGTCTGTACTC
TTAAAAATAATAAATCAACAATATGTACAATCAAATTTACAACCAAAAGTAAATGAACCCGTTGGTGCGG
TATGACTGCAACCCAGTGGCCCAGCTGAGGTCCTCCAGGCCCTGAGTCCTTTACGACTGATCAGAGCACA
AGAGAGGCCCCTCTCATCTTCACTCCAGATGGAGCATCTTCAGTTCCAAGACTTAAGGTGCAAAAGATGT
CGATTATACAGCTACAATACATGAGCAGACTTTAAAGTGAGAGAAAACATTTTACCCCCACATCCAACAA
TTATAATAAATATAGATTTAATTCCAAGTGCATATGTTATTCAATCAACATTAGGGGAGTCGGGGATCCA
GAACTTTTAGCCTAAGCCATCTCCACACCACACTTCCCTCCTCTCTGGTCTTCTCTGCAGTACCTTTCAC
GTGGCTTCTACAGATGGATCTTGTGATCTGCTGGGCATCCCAAGGCACAGAAGGGGTTATGTTCCCTCCC
ACCCCACCCCACGGCCCCAAAGCTGTTACTATAAAACCATAACCAGGGGCTCTGGCGTGTAGGACAGTGT
Notes:The Trappc10 (Tmem1) probe used in this study by Reymond et al., 2002 [PMID:12466854] was generated from clone H3108A09 from the NIA 15K clone set.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD-1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Reymond A; Marigo V; Yaylaoglu MB; Leoni A; Ucla C; Scamuffa N; Caccioppoli C; Dermitzakis ET; Lyle R; Banfi S; Eichele G; Antonarakis SE; Ballabio A, 2002 [PMID:12466854] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1038/nature01178] [ PMID:12466854] Reymond A, Marigo V, Yaylaoglu MB, Leoni A, Ucla C, Scamuffa N, Caccioppoli C, Dermitzakis ET, Lyle R, Banfi S, Eichele G, Antonarakis SE, Ballabio A 2002 Human chromosome 21 gene expression atlas in the mouse. Nature (420):582-6
Links:MGI:2666374 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI