Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:10743

Itpa inosine triphosphatase (nucleoside triphosphate pyrophosphatase) ( MGI:96622)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743
"Pseudo-wholemount" of euxassay_002913. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002913_01 euxassay_002913_02 euxassay_002913_03 euxassay_002913_04
EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743
euxassay_002913_05 euxassay_002913_06 euxassay_002913_07 euxassay_002913_08 euxassay_002913_09
EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743
euxassay_002913_10 euxassay_002913_11 euxassay_002913_12 euxassay_002913_13 euxassay_002913_14
EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743
euxassay_002913_15 euxassay_002913_16 euxassay_002913_17 euxassay_002913_18 euxassay_002913_19
EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743 EMAGE:10743
euxassay_002913_20 euxassay_002913_21 euxassay_002913_22 euxassay_002913_23 euxassay_002913_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10743Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10743_wholemount_strong.wlz
10743_wholemount_moderate.wlz
10743_wholemount_weak.wlz
10743_wholemount_possible.wlz
10743_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10743_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4332
Entity Detected:Itpa, inosine triphosphatase (nucleoside triphosphate pyrophosphatase) ( MGI:96622)
Sequence:sense strand is shown

>T4332
GGCATTCTGGACCGTAACCCTCGCTTGCAATGGCTGCGTCTTTGGTCGGGAAGAAGATCGTGTTTGTGAC
GGGAAACGCCAAGAAGCTGGAGGAGGTCATTCAGATTCTCGGAGATAATTTTCCATGCACTTTGGAGGCT
CAGAAAATTGACCTGCCTGAGTACCAGGGAGAACCGGATGAGATTTCCATACAGAAGTGTCGGGAGGCAG
CTCGACAGGTGCAGGGCCCTGTCCTGGTGGAAGATACCTGTCTGTGCTTTAACGCACTTGGGGGACTGCC
TGGCCCCTACATAAAATGGTTCCTACAGAAGCTGAAGCCTGAAGGTCTCCACCAGCTCCTGGCCGGCTTT
GAAGACAAATCGGCCTATGCACTCTGCACATTCGCTCTCAGCACTGGGGACCCAAGCCAGCCAGTGCTTC
TCTTCAGAGGCCAGACCTCGGGACAGATTGTGATGCCACGAGGCAGCCGGGACTTTGGCTGGGATCCCTG
CTTTCAGCCTGATGGATATGAGCAAACGTATGCAGAGATGCCAAAGTCTGAGAAGAACACCATTTCTCAT
CGGTTCCGGGCCCTGCACAAGCTACAGGAGTACTTTAGTGTGGCTGCTGGGGCTGGTGACCACTAGCGCC
ATGGGTAGGGGCTAGTGCAGAACTCCCTAGGAGGCAGGCACTCCTGTGAGGCTTTCTCTGGGTTCCCCTC
TGCCAGGAGATCCAGGCAGCATCAGGAGCCAGTTCTTGGAAGAGCAGTTGGCTCTGCATAGGGGAACTCT
GAGCCAGTTGATACTAAACTCTTGTCCCTTGGATTCAAGAGTTTCCTTTGACCAGGCATGGTAGCGCACA
CTTTTAATCCCAGAATTTGGGAGGCAGAGGCAAACAGATCTTTGTGAGCTCAGGGCCAGCCTGGTTTACA
TAGTGAATTCCTGGATAGCCAGAGCTACATAGTGAGACCTTGTCTCAAAAACAAAACAAAGAAACCAAAA
CAACAACAACAACAAAAAGTTGTTCTTGTAGCCTCTGGCTCTGGGATCCTGGGAAAATTTTGGTTGTTTG
TTCTTATATGGTTGAAGGTTTGGCAAAGAAACACACAACTTTTGGTTTTAGAATATAGCAAATGTAAATT
CTAGAAGACTTTCCAAAATAAATGGTGTGTCTGTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
Notes:The probe template was PCR amplified from IMAGE:4512398 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4512398 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10739 same embryo
 EMAGE:10740 same embryo
 EMAGE:10742 same embryo
 EMAGE:10741 same embryo
 EMAGE:10744 same embryo
 EurExpress:euxassay_002913 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS