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EMAGE:10787

Ears2 glutamyl-tRNA synthetase 2 (mitochondrial)(putative) ( MGI:1914667)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10787
euxassay_003040_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10787Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10787_wholemount_weak.wlz
10787_wholemount_possible.wlz
10787_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10787_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4835
Entity Detected:Ears2, glutamyl-tRNA synthetase 2 (mitochondrial)(putative) ( MGI:1914667)
Sequence:sense strand is shown

>T4835
CGTGTGTGTTTCTAGTCCACATGGCGGCGCCCCTCAAGAGGCTTCTGCTGGCCGAGCCGCACGTGGTGGC
CCTCGGGCACCGCGTGGGGCGGCGCGAGGCCAGTCTGGGCCCAGATCCCGGGGCCCCGGTGCGAGTGCGC
TTCGCTCCCAGCCCCACAGGCTTCCTGCACCTGGGTGGCCTCCGTACTGCCCTCTACAACTACATCTTTG
CCAAGAAGCACCAAGGGAGCTTCATTCTGAGGCTGGAGGACACCGATCAGAGCCGCTTGGTGCCAGGGGC
AGCAGAAAGCATTGAGGACATGCTGGAGTGGGCAGGCATCCCACCTGATGAGAGTCCCCGCCGGGGTGGT
CCTGCAGGGCCCTACTGTCAGTCCCAGCGGCTGGCTCTGTATGCCCAAGCCACGGAAGCCTTGCTGAGAT
CTGGAGCTGCCTATCCCTGTTTCTGTTTGCCACAGCGGCTGGAGCTTCTGAAGAAGGAAGCACTGAGGAG
CCGACAGACACCCCGGTATGACAATCGGTGCCGGAACCTGAGCCAGGCACAGGTGGCCCAGAAGCTGGCC
GTAGACCCCAAGCCTGCTATCCGCTTCCGTCTAGAGGAGGCAGTACCAGCCTTCCAGGACCTGGTATATG
GCTGGACTCAGCATGAAGTGGCCAGTGTGGAGGGGGACCCAGTTATCCTGAAAAGTGACGGCTTTCCCAC
CTACCACCTAGCCTGTGTGGTAGATGACCACCACATGAGCATCAGCCATGTGCTGCGGGGCTCCGAGTGG
CTAGTCTCCACCTCCAAGCACCTGCTCCTCTACCAGGCCCTGGGCTGGCAGCCACCTCGATTTGCTCATC
TGCCCCTGCTCCTCAACAGGGATGGTAGCAAGCTGTCTAAGAGGCAAGGGGACATTTTCCTGGAACATTT
TGCTGCCACCGGTTTTCTGCCAGAAGCCTTGCTTGACATCATCACCAACTGTGGCTCGGGGTTTGCAGAG
AACCAAATGGGCAGGACCCTGCCGGAGCTGATTACACAGTTTGACCTGACGCGGATCACCTGCCACTCAG
CCCTGCTGGACCTAGAGAAGCTCCCAGAATTTAACAGGCTGCACCTCCGCCGGCTGGTGAGCAGTGAGAC
CCAGAGGCCCCAGTTGGTGGAGAAATTGCAGGGCCTGGTGAAGGAGGCATTCGGGAGTGAACTGCAAAAC
AAGGATGTTCTGGACCCTGCATATATGGAGAGGATCCTCCTGCTGAGACAGGGTCACATCAGCCGCCTGC
AGGATCTGGTCTCCCCAGTGTACTCCTACTTATGGACCCGCCCTGCTGTCCATCGATCAGAACTGGGTGC
CAGCTCGGAAAACGTGGATGTGATTGCCAAGCGCTTGCTGGGGCTTTTAGAAAGACCTGGCTTAAGCCTA
ACTCAGGATGTGCTGAACAGAGAGCTGAAGAAGCTGTCAGAAGGTCTGGAAGGCGCCAAGCATAGCAGTG
TGATGAAGCTCCTCCGGATGGCCCTCAGTGGACAGCTGCAAGGACCCCCTGTGGCTGAGATGATGGTGTC
CTTGGGCCCAAAGGAAGTACGGGAACGAATCCAGAAGGTGCTTTCTAGCTAGGGAGAAGATGCATAGCAC
CATCGAGATGACCATGAGAGCCTCTAACCATGGAAACTGAATTCTGAGGAGAGCAGGAAACCTGGAGCCT
ATTGGGACCCTTTCAGGATGAACAGCTGTAGAAACAAGCACTCTGACTACTCTCATCAGCTGGCCTTCGG
GGACCCCAGCTGTTTCACTGTTGACTCTGGGAATAATGAGCTTGAACTTGTGTCTTGATTCTTTCCTATT
TTTTTTAAAGACTTTTTAAAAATGTGAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5064949 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5064949 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10786 same embryo
 EMAGE:10785 same embryo
 EMAGE:10783 same embryo
 EMAGE:10788 same embryo
 EMAGE:10784 same embryo
 EurExpress:euxassay_003040 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS