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EMAGE:10788

Prr5 proline rich 5 (renal) ( MGI:1924714)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788
"Pseudo-wholemount" of euxassay_003046. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003046_01 euxassay_003046_02 euxassay_003046_03 euxassay_003046_04
EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788
euxassay_003046_05 euxassay_003046_06 euxassay_003046_07 euxassay_003046_08 euxassay_003046_09
EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788
euxassay_003046_10 euxassay_003046_11 euxassay_003046_12 euxassay_003046_13 euxassay_003046_14
EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788 EMAGE:10788
euxassay_003046_15 euxassay_003046_16 euxassay_003046_17 euxassay_003046_18 euxassay_003046_19
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euxassay_003046_20 euxassay_003046_21 euxassay_003046_22 euxassay_003046_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10788Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10788_wholemount_strong.wlz
10788_wholemount_moderate.wlz
10788_wholemount_weak.wlz
10788_wholemount_possible.wlz
10788_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10788_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4836
Entity Detected:Prr5, proline rich 5 (renal) ( MGI:1924714)
Sequence:sense strand is shown

>T4836
GTGCAGGCCTCCGCCAAGGTCACAGGCAGACAGGCCAAGGGTACCCCTTCCCTCGCCCACCCTGCAGCTT
CTGGCTCCTGAGCAAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGGGAGCCGGG
CGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATC
CATAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGG
GCGTCCGGCAGCTGCTGAAGACGGAGCTGGGGTCCTTCTTCACTGAGTACCTGCAGAACCAGCTGCTCAC
GAAGGGCATGGTGATTCTTCGTGACAAGATTCGCTTCTACGAAGGACAGAAGCTGCTGGACTCATTGGCG
GAGACCTGGGATTTCTTCTTCAGTGATGTGCTGCCAACCCTGCAGGCCATCTTCTATCCTGTGCAGGGCA
AGGAGCCGTCGGTGCGCCAGCTCGCCCTGCTGCATTTCCGGAACACCATCACCCTCAGCGTGAAGCTGGA
GGACGCGCTGGCCCGCTCTCACGCGCGTGTTCCCCCTGCCATCGCACAGATGCTGCTGGTACTGCAGGGG
GTACATGAGTCCAGGGGTGTGACTGAAGACTATCTGCGCCTCGAGACACTGATTCAGAAGGTGGTGTCGC
CGTACCTGGGCACCTATGGTCTCTATTCCAATGAAGGACCTTGTACTCATTCCTGTATCCTCGAGAAACG
ATTCCTACGCCGCTCCCGCTCTGGGGATATCCTAGCCAAGAACCCAGTGGTGCGCTCCAAAAGCTACAAC
ACTCCCCTGCTCAATCCTGTGGCCGAGCATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCA
GACACTCAGTCTCCGAGATGACATCTTGTCCGGAGCCCCAGGGCTTTGTGGACACGCCTGGCCAGGGCCC
TTCGGGGACCTTCCGGTCTTCTCCAACACCCCACTCAGGGCCTTGCCCCAGCAGACTATACCCCCCTGCC
CATTCCCCGGAACAGGGCCCAGGCCATGGCTCCCCATCCACCTCCAGCCCAGAGACTCTTGTGGACCAGA
TCCTGGAGTCCGCGGACTCAGACTCGGAAGGGATATTCATTGACTTTGGGCGGGGAAGTCGCTCCAGTGT
GTCTGACTTTGAGGCACCGGGAGGCCGGCCAAGTGTTGTGTGATGGCCTGAGACTAGTTCATGTTTTTAC
TGAGCCCTGTGTGTTTGCGTGCCTGTGTATGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTCAAGTCACTT
TATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTG
GCACTGCCCAGATGCATACTCAACCACCTGGAGGATGGATGGGGTCACCATGTGCCCTCCTGCCCACCCC
ACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGG
CCTCCGGAGTGACGGGACTCAAGCCACAGTCAGACCTGCCTGCCTGCCTCCCTCTGCTCTGGGTGGCCAC
AAAATAGGAAGGCATGAAATAAATTTACAGCCCCAGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5065129 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5065129 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:10786 same embryo
 EMAGE:10785 same embryo
 EMAGE:10787 same embryo
 EMAGE:10783 same embryo
 EMAGE:10784 same embryo
 EurExpress:euxassay_003046 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS