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EMAGE:11069

Oog3 oogenesin 3 ( MGI:2684047)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11069
euxassay_006510_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11069Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11069_wholemount_possible.wlz
11069_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11069_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8078
Entity Detected:Oog3, oogenesin 3 ( MGI:2684047)
Sequence:sense strand is shown

>T8078
AAGAGGTAATCCGTTGGAATCATAGCCTACCTCAGTCTGACTATGATGATCTGTCACCAGTGTCTAGATC
AAGATGACTCTTCAGAAGAAGAAGAAGCAGTTAGTGTCTACTCCCCATCCACCCTGGTGAAACTGGCAAG
ACAGAGGCTACTGAGGGAGGAGCTTTGGTCATTTCTGCTCTCAAGGGCCTGCCAAATATGCTGTTCCCAG
TGATATTTGAGGAGGCCTTCATTAATGGTCATACAAAGATCTTGAAGGCCATGATACCTATGTGGCCCTT
CCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACCTGAAGACTTTGAAGGCTGTTCTTGATGGA
CTAGATATACTTCTTGCACAAAAGGTTCGCTCCAGTAGGTGCAAACTCAGAGTACTCAAATGGAGAGATG
AACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAAGCTGAAGACTTACCAGAGTTAATGACACA
GAAGCATCCCGTGCAGAACAACCCTGACTGTGGGGTAAAGAAAGAATTGAGGGTAACAACTGAACTCTCT
GTCATGAAGGGCAGACTTGATGATTCTGCCACATACTTGTTGGAGTGGGCCCAGCAGAGAAAAGATTCCA
TTCACCTACTCTGCAGAAAGCTGGTAATTGAAACCTTAACCAAAGACACAGTGATAGAAATCTTCAAAAT
TGTAAATGCAGATTGTATACAGGAGCTGGAGCTGTATTCTCTTTGCCTAGAAGATTTGGCTTTTCTTAAT
CCCTACCTGAGACAGATGGACAATCTTCTTGAACTCACACTTGATCACGTCACAGATTCCCTCAGTATGG
GTGATTCTGAAATGTGTGAGGAAGAAATGATCACATTGGTTTCTCAACTTCCCACATTTCCCTGTCTCCA
GAAACTCTGTGTAAATGATGTCTACTTTATATATGGCAACCTGAATGAAATCCTCAGGTGCCTGAAGAAG
CCATTGGTATCATTTTGCATCAGTAACTGTGAACTCTCACAGTCAGACTTGGATTGCCTGCCCTATTGCC
TGAATATTTTTGAGCTAAAATGTTTGTACCTTATTGATATACCTTTAAATCATTTATGCCTTGATCCTCT
CGGGTTTCTCCTTGAGAGTGTTAGACATACCCTGGAATGCTTGGAATTAAAGTCATGTGATATGGGGGAA
CCTCAATTCAATGCCCTGCTGCCTGCCCTAAGTCAATGTTCCCACCTCACAGATGTCAGTTTTTGGGAAA
ATGAACTCTCTCTGCTGTTCCTGAAACAACTTCTACAGCACACATCCAAGCTGACTCAGCTGAGCTATGA
GCTGTACCCTGCCCCTCTTGAGTGCTATGATGACAGGGGTTTAATACTATCACACAGATTAGAACAATTT
TGTCCCGAACTCCTGGATATACTCAGGGCCAAAAGACAGCCCAAGGATATTGCCTTTGTTACAAACCCAT
GTTCTAAATGTGGTAGATACTATGTTTATGATCCAAAGACCCAACGTTTCTCTTTGGAAGACACAACCCT
GTAAGGTTGATTGTGGAACAGAGAAATGCAAGCTTAGTATTGGGGATCGATGAAATCTTAGTTGAATTTC
CCTTGGTTAAAGGAACATGGATTTGTCAATCATGTAAAGGTCTGAGATAAACAATAAAAATGCAAGATAT
TCCTCTGAGCTAGTGAATGAATGTACCATCTGCAAGAAGTGTCAAGCATGCTTTTATTCTCTAGGATTAT
TGTAGATTGAGTATGTTACAATAGAGGCAAACTTCCATGAGGATATTGTTCTCCTTTGTTGACTGCGTAT
AATAAATGTGTTAACTTTGTTTTAAAAAAAAAAAAAAAAAG
Notes:The probe template was PCR amplified from IMAGE:30049894 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30049894 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11070 same embryo
 EMAGE:11072 same embryo
 EMAGE:11068 same embryo
 EMAGE:11071 same embryo
 EurExpress:euxassay_006510 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS