Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:11161

Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 ( MGI:1925644)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161
"Pseudo-wholemount" of euxassay_003581. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003581_01 euxassay_003581_02 euxassay_003581_03 euxassay_003581_04
EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161
euxassay_003581_05 euxassay_003581_06 euxassay_003581_07 euxassay_003581_08 euxassay_003581_09
EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161
euxassay_003581_10 euxassay_003581_11 euxassay_003581_12 euxassay_003581_13 euxassay_003581_14
EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161
euxassay_003581_15 euxassay_003581_16 euxassay_003581_17 euxassay_003581_18 euxassay_003581_19
EMAGE:11161 EMAGE:11161 EMAGE:11161 EMAGE:11161
euxassay_003581_20 euxassay_003581_21 euxassay_003581_22 euxassay_003581_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11161Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11161_wholemount_strong.wlz
11161_wholemount_moderate.wlz
11161_wholemount_weak.wlz
11161_wholemount_possible.wlz
11161_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11161_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6714
Entity Detected:Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 ( MGI:1925644)
Sequence:sense strand is shown

>T6714
ATGGATTCCTACGACCTGTTTCGCCGGCTTGGAGCCGGCGCCAAGTTCGACGTGAAGCGCTTCTCAGCAG
ACGCTACTCGATTCCAGGTAGGAAAAAGGAAATTCGATTCCGAGTCTTTGGAGGTCCTGAAGGGACTAGA
CTTCTTCGGAAACAAGAAGTCCGTCTCAGATGAATGTGGAGCATTGCAAATACACCAGGAGCCCCCAAAT
GAGGAGAAAACAGAAGGGGTCCTGTTGGAAAGGAGTAAGGAGCCCAAGAAGAAAAAGAGAAAGAAGATGA
CTTCAGAAGTTCCTGCTCAAGAAGACCTTGACGGTGGTATCCAGTGGACATCCTCTGTAGAAGCAAAGCT
TCAAGAGGAAAAAGTCAGTGGAGAGAAGAAGTTAACTTCAGGAAAGTTGGAACATCTCAGAAAGGAAAAG
GTCAACTTCTTTCGGAACAAGCACAAGATACATGTCCAAGGAACTGATCTTCCTGACCCAATTGCTACAT
TTCAGCAACTTGACCAGGAATATAAAATCAATTCTAGATTGCTCCAGAATATTCTAGACGCAGGCTTCCA
AGTGCCCACACCAATTCAGATGCAAGCCATTCCAGTTATGCTGCATGGTCGGGAACTTCTGGCTTCTGCT
CCAACCGGATCTGGGAAGACGTTGGCATTTAGCATCCCCATTTTAATGCAGCTGAAACAACCGACAAATA
AAGGCTTTAGAGCCCTGGTTATATCCCCAACCCGAGAACTTGCAAGCCAGATTCACAGAGAATTAATTAA
AATATCTGAGGGTACAGGATTCAGGATACATATGATCCACAAAGCTGCAATAGCAGCTAAGAAATTTGGA
CCTAAATCATCTAAGAAGTTTGATATCCTTGTGACTACTCCAAATCGACTGATCTACTTGTTGAAGCAGG
ATCCACCAGGGATTGACCTAACAAGTGTCGAGTGGCTGGTAGTAGATGAATCAGACAAACTGTTTGAAGA
TGGCAAAACTGGGTTTAGAGAGCAGCTGGCTTCCATTTTCCTGGCCTGCACATCGCCCAAGGTCAGAAGA
GCAATGTTCAGCGCAACTTTTGCGTACGATGTTGAACAGTGGTGCAAGCTCAACCTGGACAACGTCATTT
CCGTGTCCATTGGAGCAAGGAATTCTGCAGTTGAAACTGTTGAACAAGAGCTTCTCTTTGTTGGATCTGA
GACTGGAAAACTTCTGGCCATGAGAGAACTTGTTAAAAAGGGTTTCAAACCACCTGTTCTTGTTTTCGTT
CAGTCCATTGAAAGAGCTAAAGAACTTTTCCATGAGCTCATATATGAAGGTATTAATGTGGATGTCATTC
ATGCAGAAAGAACACAGCAGCAGCGAGATAACACAGTCCACAGCTTCAGAGCAGGAAAAATCTGGGTTCT
TATTTGTACAGCCTTACTTGCAAGAGGGATTGACTTTAAAGGCGTAAACCTGGTCATCAATTATGATTTC
CCCACCAGCTCAGTGGAGTACATCCATAGGATAGGTCGGACTGGAAGAGCAGGGAATAGGGGAAAGGCTG
TTACATTTTTCACTGAAGATGATAAACCATTACTAAGAAGTGTTGCCAATGTTATCCAGCAGGCTGGTTG
TCCTGTGCCCGAATACATAAAAGGTTTCCAGAAACTACTAAGCAAACAAAAGAAAAAAATGATTAAGAAG
CCGTTGGAAAGGGAGAGCATTTGTACAACTCCAAAGTACTTCTTAGAGCAAGCTAAACAGAAAAAGGTTG
CTGGCCAAAACAGCAAGAAGAAAGAAACTCTCAAAGAGAAAAGTTAAAAAATAAATACCTTAGAAGGCAA
TCCCTGCAGTGTAACTTATGAGCCTGGCATGGATTCTCATGGAGTACTTACAACCATCTTTACCAAACAT
TTGAAATCCACAAGGATATGAGAGGACAGAATGGTTCTGATGTAGTGATGCATCAAGCTTCACTTTGTAG
GTGGGATTTATACAATGGAAATAACAGGCATTGGCATTTCTGCCTGAATCCAGAGAGATACTTCTTATAG
AAGAACAAGAGCCGATGCTAAAATAACACCCAAGTGTGGTGAACTCTTAAGGATTTTGCCCTTCAAGTGT
GAAGGAAAGTGTGATGCATGCTGTGGAGAGGCGTCTGGAACAGAATTTTAAAATAAAACCTTGAGTTTGA
GTGCACCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3662249 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3662249 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11163 same embryo
 EMAGE:11158 same embryo
 EMAGE:11160 same embryo
 EMAGE:11162 same embryo
 EMAGE:11159 same embryo
 EurExpress:euxassay_003581 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS