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EMAGE:11237

Gstk1 glutathione S-transferase kappa 1 ( MGI:1923513)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237
"Pseudo-wholemount" of euxassay_003195. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003195_01 euxassay_003195_02 euxassay_003195_03 euxassay_003195_04
EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237
euxassay_003195_05 euxassay_003195_06 euxassay_003195_07 euxassay_003195_08 euxassay_003195_09
EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237
euxassay_003195_10 euxassay_003195_11 euxassay_003195_12 euxassay_003195_13 euxassay_003195_14
EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237 EMAGE:11237
euxassay_003195_15 euxassay_003195_16 euxassay_003195_17 euxassay_003195_18 euxassay_003195_19
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euxassay_003195_20 euxassay_003195_21 euxassay_003195_22 euxassay_003195_23 euxassay_003195_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11237Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11237_wholemount_strong.wlz
11237_wholemount_moderate.wlz
11237_wholemount_weak.wlz
11237_wholemount_possible.wlz
11237_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11237_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4899
Entity Detected:Gstk1, glutathione S-transferase kappa 1 ( MGI:1923513)
Sequence:sense strand is shown

>T4899
GACCCACGCGTCCGTGTAGAATGGGGCCGGCGCCGCGCATCCTGGAACTCTTCTACGACGTGCTGTCCCC
GTACTCCTGGCTGGGCTTTGAGGTCCTATGCAGATACCAACACCTCTGGAATATAAAGCTGCAGTTGCGG
CCCACTTTAATCGCTGGGATCATGAAAGACAGCGGAAACCAACCACCTGCTATGGTTCCCCGAAAAGGCC
AGTACATCTTCAAAGAGATTCCTCTCCTGAAGCAGTTCTTCCAGGTTCCCCTCAACATACCCAAGGATTT
CTTTGGTGAGACTGTGAAGAAAGGAAGTATAAATGCCATGCGCTTCCTCACCACTGTAAGCATGGAGCAA
CCAGAGATGCTGGAGAAGGTGTCCAGAGAGATATGGATGCGTGTATGGTCTCGAGATGAAGATATCACGG
AGTATCAGAGCATTCTGGCTGCAGCAGTGAAGGCTGGAATGTCCACAGCGCAAGCCCAACACTTTCTGGA
GAAGATCTCCACACAACAGGTGAAGAACAAGCTCATTGAGAACACGGATGCAGCCTGCAAATATGGGGCC
TTTGGGCTACCCACCACTGTTGCCCATGTGGATGGTAAAACCTACATGTTATTTGGGTCTGACCGCTTGG
AGTTGCTAGCTTACCTGCTAGGAGAGAAGTGGATGGGCCCTGTACCCCCAACTGCGAATGCCAGACTTTA
AGACTGCCTTACAGAGTAATCTTTGATTTCTCCATCTGATGTGGCCCTGGGAGCTGGAGCAAGAGTCCAC
CTTTAGCTGTGCCTGCCTTTACTTCTGTGCCTCAGAAGTGCCTTTTGAAAAGCCTTAAATTCTGCATTCC
CATAAAATAAAGTTGATGCCACCAGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5100572 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5100572 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11239 same embryo
 EMAGE:11236 same embryo
 EMAGE:11238 same embryo
 EMAGE:11235 same embryo
 EMAGE:11234 same embryo
 EurExpress:euxassay_003195 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS