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EMAGE:11278

Bst2 bone marrow stromal cell antigen 2 ( MGI:1916800)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278
euxassay_006626_01 euxassay_006626_02 euxassay_006626_03 euxassay_006626_04 euxassay_006626_05
EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278
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euxassay_006626_11 euxassay_006626_12 euxassay_006626_13 euxassay_006626_14 euxassay_006626_15
EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278 EMAGE:11278
euxassay_006626_16 euxassay_006626_17 euxassay_006626_18 euxassay_006626_19 euxassay_006626_20
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euxassay_006626_21 euxassay_006626_22 euxassay_006626_23 euxassay_006626_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11278Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11278_wholemount_strong.wlz
11278_wholemount_moderate.wlz
11278_wholemount_weak.wlz
11278_wholemount_possible.wlz
11278_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11278_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7051
Entity Detected:Bst2, bone marrow stromal cell antigen 2 ( MGI:1916800)
Sequence:sense strand is shown

>T7051
GACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGGACGGATCACATGGCGCCCTCTTTCTATCACTATCT
GCCCGTGCCCATGGATGAGATGGGGGGGAAGCAAGGATGGGGCAGCCACCGGCAGTGGCTGGGGGCCGCG
ATCTTGGTGGTCCTGTTCGGGGTTACCTTAGTCATCCTGACAATCTACTTCGCCGTCACAGCGAACAGCG
TGGCCTGTAGAGACGGGTTGCGAGCGCAGGCTGAGTGCCGGAACACCACGCACCTGTTGCAGCGCCAGCT
CACCCGCACCCAGGACAGTCTGCTGCAGGCCGAGACACAGGCAAACTCCTGCAACCTGACCGTGGTGACC
CTTCAGGAGTCCCTGGAGAAGAAGGTGTCTCAAGCCCTGGAGCAGCAGGCCCGCATCAAGGAGCTTGAGA
ATGAAGTCACGAAGCTGAACCAGGAGCTGGAGAATCTGAGGATCCAAAAGGAGACTTCTAGCACAGTGCA
GGTGAACTCTGGCAGCTCCATGGTGGTCTCCAGCCTACTGGTGCTCAAAGTGTCACTGTTCCTGCTCTTT
TGAGGACTCATTAGTTGGCAGGTCACAGTTGTTTGAAGTCACTATGGGTCATAGTGACTCTGGAGAGGTC
CTGGCAGCCCTGAGGATGTGGAAACCACTAGGGGGCTCCAGATTGGGTCTTCCTCCGCAGAACTTTAGGA
CTGGGGAGTGGGGAGGGAGTTCTGCTTTATTGCTTTTGCAGTTATTGGGGGGGGTCACATATTTCTGGTG
TCTTTGACCTGGAAAAATAAAGTAATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4009434 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4009434 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11279 same embryo
 EurExpress:euxassay_006626 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS