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EMAGE:11666

Prss46 protease, serine, 46 ( MGI:1921556)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666
"Pseudo-wholemount" of euxassay_006955. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006955_01 euxassay_006955_02 euxassay_006955_03 euxassay_006955_04
EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666
euxassay_006955_05 euxassay_006955_06 euxassay_006955_07 euxassay_006955_08 euxassay_006955_09
EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666
euxassay_006955_10 euxassay_006955_11 euxassay_006955_12 euxassay_006955_13 euxassay_006955_14
EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666
euxassay_006955_15 euxassay_006955_16 euxassay_006955_17 euxassay_006955_18 euxassay_006955_19
EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666 EMAGE:11666
euxassay_006955_20 euxassay_006955_21 euxassay_006955_22 euxassay_006955_23 euxassay_006955_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11666Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11666_wholemount_strong.wlz
11666_wholemount_moderate.wlz
11666_wholemount_weak.wlz
11666_wholemount_possible.wlz
11666_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11666_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T10007
Entity Detected:Prss46, protease, serine, 46 ( MGI:1921556)
Sequence:sense strand is shown

>T10007
ACACAGCTAAATGATGTGTTGGTGGTCTGCCATGGCCCATGGGATGAGGGCTACCCTTTGCATCCCTCTC
TCCACTCTCCCCTCAGGTCCCTGGATCTGGTCCTGTGGTCAGACCAACATAACCTGCAAGGTGGTAAATG
GGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAATGTACATCTGCAG
CGGCTCCCTCATCCACCACCACTGGATCCTCACCGCTGCACACTGCTTACAAAGATCCAAGAACCCGGCT
AAATACACTGTGAAGGTGGGAGTCCAGACCCTCCCAGACAACAGCACCTCTGAGCTCCTGGTCACTAGAA
TTGTAATTCACGAGAACTTCATCAATCGCATGTCTGACGACATCGCCATCCTGAAGCTCAAGTATCCTGT
CACTTGGTCCCCCCTCGTCCAGCCAATCTGTCTCCCCTCATTCAATTTAAAGCCAAGCATTGGAACCATG
TGCTGGGTCGTCGGGTGGGGACTTGAAAAGGCCGAAGGGCACCCAAAGACTCCCTATAGTGTCCAAGGTT
TGGCTGTCAGGATTGTGAACAATGAAATCTGCAATCATCGGTACCAGTTCCTCCTGCTGAAGAACCAGAA
AAAGTTCATTGGGAACGACATGTTGTGTACAAGCTCAGAATGGGGCCTGGACACTTGTCAGGACACCTCC
GGAAGCTCTCTGGTTTGCCAGATGAACAAGACCTGGGTCCAGATGGGCGTGGTGAGCTGGAACTTTGACT
GTGGCCGTCGCCAATTCCCAAGCGTCTACACCAGCACCTCCCACTTCACCCAGTGGATCAAGAGACAGAT
TGGCGACCTGAAGTTTACCAGCATGGCTGTCCCCTCCTTCCTGAGCCCATTCATCCTCACTGGCTACATT
CTGCTGGTATCCTTGGGCTCCCTGTGGCTCTTGTGAGCTGTGTTTCTATAACAGCCACTCCCAGAGGCTA
CTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGA
GGGACTTGGGGAAGGGTCCTTGACCCACTGTGGGTTTTGTTCCCCAGTTGTTCAATGAAGATGCTCTTGA
ACCTTTTTGAGCCATCTGAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTCAT
AAAACTTGACTGTTTCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30284660 using vector (pDNR-LIB) specific primers. Forward Primer - name:M13 forward (-21), sequence:TGTAAAACGACGGCCAGT; Reverse Primer - name:T3-pDNR-LIB rv, sequence:CAAATTAACCCTCACTAAAGGGTGTTCACTTACCTACTGGGC. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30284660 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11668 same embryo
 EMAGE:11669 same embryo
 EMAGE:11665 same embryo
 EMAGE:11670 same embryo
 EMAGE:11667 same embryo
 EurExpress:euxassay_006955 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS