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EMAGE:11676

Psmg1 proteasome (prosome, macropain) assembly chaperone 1 ( MGI:1860263)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676
"Pseudo-wholemount" of euxassay_006797. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006797_01 euxassay_006797_02 euxassay_006797_03 euxassay_006797_04
EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676
euxassay_006797_05 euxassay_006797_06 euxassay_006797_07 euxassay_006797_08 euxassay_006797_09
EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676
euxassay_006797_10 euxassay_006797_11 euxassay_006797_12 euxassay_006797_13 euxassay_006797_14
EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676
euxassay_006797_15 euxassay_006797_16 euxassay_006797_17 euxassay_006797_18 euxassay_006797_19
EMAGE:11676 EMAGE:11676 EMAGE:11676 EMAGE:11676
euxassay_006797_20 euxassay_006797_21 euxassay_006797_22 euxassay_006797_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11676Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11676_wholemount_strong.wlz
11676_wholemount_moderate.wlz
11676_wholemount_weak.wlz
11676_wholemount_possible.wlz
11676_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11676_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8210
Entity Detected:Psmg1, proteasome (prosome, macropain) assembly chaperone 1 ( MGI:1860263)
Sequence:sense strand is shown

>T8210
GGGACCATGGCTGCCACGTTCTTTGGCGAGGTGGTGAAGGCGCCGTGCAGAGCTGGGACTGAGGAGGAAG
AAGAGGAGGAGGAGCAGAGCAGGCGGGACACGCCGGAGGACCGGGAGGTCCGGCGGCAGCTGGCGCGGAA
GAGGGAGGTTCGGCTTCTCCGAAGACAGACAGAAACATCTCTGGAGGCTGTGCTCCTAGAGACACACCCT
TGCTCCAAGTTTATAATTGCAGTAGGAAGCAACGCAACAGCATTCCTGTCAGCGTTTGTTATGAACTCGG
GAGTCTGGGAAGAAGTCGGTTGTGCTAAGCTCTGGAATGAATGGTGCAGAACTACAGACACTGTCCGTCT
GTCCCCTACAGATGTTTTCTGTGTGTTTTATCAACTGAAATCAGATCCCTCGGTTTTTCTATGTCAGTGT
AGCTGCTACATTGCTGAGGATCAGCAGTTCCAGTGGTTGGAGAAGGTTTTCGGCTTCCAACCCAGAAAGA
GCATGCAGGTAACCGTTCTCACATGCCGGCACATCACAGACTACAAGACCCCCGAGTCTACCTGCAGCCT
TTCCTCTCCTTTCCTGAGAGCCCTAAAAACTCAGACATTCAAAGATGCCCTCTGCTGCCCACTGCTGGAA
CAGCCGAACATTGTGCATGACCTGTCTGCAGCAGTTCTGAGCTACTGTCAAGTATGGAAAATCCCTGCGG
TTCTGTATCTGTGCTACACTGATGTGATGAAGTTGGACCGTGTCACGGTTGAAGCTTTTAAACCGTTACT
TTCTTCCAGGAGCTTGAAATGCTTGGTGAAGAACATTCCTGAAAGCACAGAAATTCTGAAGAAGTTGATG
ACCACAAATGAGATTCAGAGCAACATTTACACATGACCCCAGGTGGCCAGGACCTGCCTGTTCCAGGGGG
CAGTCACTGATGTTTTGTATTTTATTCTGGCTTGGGATGTTTTGAGAGTAATAAAAATTTTAAAAATTAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:1196077 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:1196077 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11677 same embryo
 EMAGE:11679 same embryo
 EMAGE:11678 same embryo
 EMAGE:11675 same embryo
 EurExpress:euxassay_006797 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS