Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:11719

Nus1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) ( MGI:1196365)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719
"Pseudo-wholemount" of euxassay_007110. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_007110_01 euxassay_007110_02 euxassay_007110_03 euxassay_007110_04
EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719
euxassay_007110_05 euxassay_007110_06 euxassay_007110_07 euxassay_007110_08 euxassay_007110_09
EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719
euxassay_007110_10 euxassay_007110_11 euxassay_007110_12 euxassay_007110_13 euxassay_007110_14
EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719
euxassay_007110_15 euxassay_007110_16 euxassay_007110_17 euxassay_007110_18 euxassay_007110_19
EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719 EMAGE:11719
euxassay_007110_20 euxassay_007110_21 euxassay_007110_22 euxassay_007110_23 euxassay_007110_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11719Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11719_wholemount_strong.wlz
11719_wholemount_moderate.wlz
11719_wholemount_weak.wlz
11719_wholemount_possible.wlz
11719_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11719_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5928
Entity Detected:Nus1, nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) ( MGI:1196365)
Sequence:sense strand is shown

>T5928
CCCACGCGTCCGGTTGGCAGTGGCGAGGGGCTCGGGCGCGGGGGGTGGGGGGACGCGGAGCGATGGCCCG
CGCCGGCCGCTGGGGCGGATAAGACCCTGTCGCGCCGCGGGTGTGGGCCGGAGGGAGGTGACGGTGCCCG
AGCGCCACAGGAGTATGACGGGGCTGTACGAGCTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGCCTGCA
CCTCACGCTCACCTCCTGGCTCCGCGTTCGCTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGTCGC
GCCGCCTCCGCCGCGGTCCTAGCGCCGCTCGGCTTCACGCTCCGCAAGCCCCGGGCCGTCGGCAGGAACC
GGCGTCATCACCGGCACCCGCACGGGGGACCGGGACCGGGACCGGGACCGGCCGCCACCCATCCTCGGCT
GCGCTGGCGCGCGGACGTCCGGTCCCTGCAGAAGCTGCCGGTGCACATGGGCCTGTTGGTCACGGAGGAA
GTGCAGGAGCCCAGCTTCTCAGACATCGCCAGCCTCGTGGTGTGGTGTATGGCCGTGGGGATCTCCTACA
TTAGCGTCTACGACCACCAAGGTATTTTCAAGAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACA
GCAACAGGAACTTTTGGGCCAAGATTGTTCCAAATACTCAGCAGAGTTTGCAAATAGTAATGACAAAGAC
GATCAAGATTTAAATTGCCCTTCGGCAGTGAAGGTGCTGTCCCCAGAAGATGGAAAAGCGGATATTGTGA
GAGCTGCCCAGGATTTTTGCCAGTTAGTAGCCCAGCAGCAGAGGAAGCCCACAGATCTGGATGTAGATCT
GCTAGGCAGCTTACTTAGTTCACATGGGTTCCCTGATCCTGACTTAGTGTTGAAGTTTGGTCCTGTGGAC
AGCACATTAGGCTTTCTTCCCTGGCAAATCAGATTGACTGAGATCGTCTCTCTGCCTTCTCACCTAAACA
TCAGCTATGAGGACTTCTTCTCCGCCCTTCGGCAGTATGCAGCTTGCGAACAGCGACTGGGAAAGTAATG
GTCCCTACTTGCATAATTTGACTTCAGGCTTTTGGAGAAAAAGGACCCAAGTGACACTGATGTTTACAAA
GTACCTATAAAACCCTGTACACACCTAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3482163 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3482163 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11720 same embryo
 EMAGE:11716 same embryo
 EMAGE:11717 same embryo
 EMAGE:11718 same embryo
 EMAGE:11721 same embryo
 EurExpress:euxassay_007110 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS