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EMAGE:14132

Brwd1 bromodomain and WD repeat domain containing 1 ( MGI:1890651)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132
"Pseudo-wholemount" of euxassay_001814. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001814_01 euxassay_001814_02 euxassay_001814_03 euxassay_001814_04
EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132
euxassay_001814_05 euxassay_001814_06 euxassay_001814_07 euxassay_001814_08 euxassay_001814_09
EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132
euxassay_001814_10 euxassay_001814_11 euxassay_001814_12 euxassay_001814_13 euxassay_001814_14
EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132 EMAGE:14132
euxassay_001814_15 euxassay_001814_16 euxassay_001814_17 euxassay_001814_18 euxassay_001814_19
EMAGE:14132 EMAGE:14132 EMAGE:14132
euxassay_001814_20 euxassay_001814_21 euxassay_001814_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14132Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14132_wholemount_strong.wlz
14132_wholemount_moderate.wlz
14132_wholemount_weak.wlz
14132_wholemount_possible.wlz
14132_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14132_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5351
Entity Detected:Brwd1, bromodomain and WD repeat domain containing 1 ( MGI:1890651)
Sequence:sense strand is shown

>T5351
CGCGAGAGGGGAGGGGGAAGAGGCTTCAGTTAGCTCTACACAGCACAGCATAGGGTGTTCCAAGGAGGTA
GGAGATGTGGATTGTGTTGTCAGGTGAGAAAGCAGAAGGACCCACTGAATGTAAAGCAAAGGCTTGACGC
AGCTTGGTCCTCTAGAGAAATAAAAGCATGTGGGATATATGGGGAAACAATGCTAATTTCAATGGTTTGC
CCTCACAGACTGAAAACTAGGCCATTTCCAAAGGAGGGAGCAGTAAGCCCATGTGACTGCTGAATTTTAA
CTGGGTCTGATTTATGTAGTGCACATCCCTGGGAACTGAGAGAGTAAATCCTGGGGTGTTACTGACTTCT
GAAGAGGAGTGTGGGAAAGACTGTCATTAATGTCTTATTTATAACATTGGAATTCATACTGAATGATAGC
TACCTGGTATGAGTAATTCAGGGAATGTATCTTTCTAAGAAAGTTCTCAATGTGACTATTACACTTTATT
TCTTCTATGTAGCAGCAAAGATGTAAAGGCCAGACTTGTGGTCAGAAATTAGAACAAGATGCACTCATCG
CTTAAGGTGATGCAGTTGGATCCTATTTCTTACGTTTTCTCTGCTGTTCCTTAGAAGTTAGAATGTGACA
CTGCAGGTTCATTTCAGGGCTCACTAACAAGCCAAGTGTCGGGGGAGTCTGGCCTCTGGTCGTTGTGCTA
CAAATGTTTTGCCTACAGAGGATGTGGACTTTAGTTTCGTTGTTCATGGCTATTTGGTTGACATTAAGGT
CACCAGATGTGACCTTGTGAATGTACTGTCAAGTCTTTTTATCATGTTACTGGAGAAACTTGTCTTCACA
GTTTGTTTTCCTATTAAAAAATAGCTGGTGACTATGAGCATAAGCTTGGCATTGTATAATTCCAAAAAAA
AAATGGGAAACCTAAGGGGGTGTGTATGTTTCCATTAAACCATTAATGCGCACAATGTTTTTTTCTGATC
TA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:CAATTTTGTGAAAGCCATTAC; Reverse Primer - name:unspecified, sequence:CAAGTAATCTGGACACTTTGG. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14136 same embryo
 EMAGE:14133 same embryo
 EMAGE:14134 same embryo
 EMAGE:14131 same embryo
 EMAGE:14135 same embryo
 EurExpress:euxassay_001814 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS