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EMAGE:14327

Mterfd3 MTERF domain containing 3 ( MGI:1921488)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327
"Pseudo-wholemount" of euxassay_004120. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004120_01 euxassay_004120_02 euxassay_004120_03 euxassay_004120_04
EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327
euxassay_004120_05 euxassay_004120_06 euxassay_004120_07 euxassay_004120_08 euxassay_004120_09
EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327
euxassay_004120_10 euxassay_004120_11 euxassay_004120_12 euxassay_004120_13 euxassay_004120_14
EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327 EMAGE:14327
euxassay_004120_15 euxassay_004120_16 euxassay_004120_17 euxassay_004120_18 euxassay_004120_19
EMAGE:14327 EMAGE:14327
euxassay_004120_20 euxassay_004120_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14327Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14327_wholemount_strong.wlz
14327_wholemount_moderate.wlz
14327_wholemount_weak.wlz
14327_wholemount_possible.wlz
14327_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14327_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5639
Entity Detected:Mterfd3, MTERF domain containing 3 ( MGI:1921488)
Sequence:sense strand is shown

>T5639
CTGCTGCCCACAGTGCCACTGAGGTCTATTGCAGAGAGGTGACAGAATCACATTTTAGAAGCTACAGAGG
AGTCCTAAATGGACTGACTGAAGCCCTGGAGAAGGACAAAATCGCTCAGGAGAGACTATAAGGTACAATG
TGGACATTCTCAGCCTTAAGATGTGGAAATTTAGCCAGAGCTCACAGCATGCCGTGGAGGTTGCCGACAG
GACACCAACTCTGCAGACTGTGTCTTCTCAGAAAGCCGCGACCAGCTCTGAAAATCAAACCCTCTTCAGC
TTGTGTCACCTACGGAACGGACAGCCAGTCAGATAAAGAAAACAAGAGAACGGTGGAAAAGCTCAGTGCA
TGTTCAGTTGACATTAGAAAAATCCGCAGGCTGAAAGGATGGGTGCTTCTAGAGGAAGAAACCTACGTTG
AAGAGATTGCAAATATTTTGAAAGAACTAGGTGCCAATAAAACTGTGATTGCCAGTATATTAGAACGCTG
TCCGGAAGCGATTATCTGCAGTCCCGCTGCTGTTAACACCAAAAGGAAACTCTGGCAGATGGTCTGCAAA
AACGAGGCAGAGTTAGTGCAGTTAATAGAGCAGTTTCCAGAATCTTTCTTTACTGTCAAGAACCAGGAGA
ACCAGAAGCTAAATGTTCAGTTCTTTCAAGAGCTGGGACTCAGAAATGTGGTGATTAGCAGGTTTCTGAC
AACGGCCTCTAGCATTTTCCATAATCCTGTAGAGAACAATAAACAAATGATAGGGGTTCTCCAGGAGAGC
TACCTAAACTTAGGTGGATCTGAGGCCAATGCTAAAGTGTGGCTACTAAAATTATTAAGCCAAAATCCCT
TCATTGTGTTACATTCTCCTAGAGCTGTAGGTGAAACGCTGAAATGTCTTCAAGGGCAAGGCTTCACAGA
CTCTGAAGTTCTTCAGCTTCTGTCCAAACTTAAAGGGTTTCTTTTCCAACTTCAGCCAGGAAGTATCCAG
AACAGTATTTCCTTCACTAAGACTACTTTTGAGTGTACAGACTATGACCTACGACAGTTAGTTGTGAAAT
GCCCAGCCCTTCTATGTTATCCTGCTTCTGTCCTAGAAGAGAGAATCCAGGCACTGCTGAAAGAAGGCAT
CTCCATAGCTCAAATAAGAGAGTCACCAATGGTTCTGGAATTGACGCCACAGATAATTCAATATAGGATA
AGAAAGCTGAATTCTTTAGGCTACGGAATAAAGGATGGACATCTAGCAAGTCTAAATGGAACAAAAAAGG
AGTTTGAGGCTAACTTTAGCAAAATGCAAGCCAAACAAGGAAGGCCATTATTTAACCCTGTGGCATCATT
AAAGGTTGAAGAGTGACAGGACAAAGTGACTTAAGCAATTCAGCTTATAAGCACTAAGGATTCTCAGGAC
CTACTGAGATTGAGTTGTGTTCAAGTTACCTCTTAATTGGTAGTTTCTGACTCATTTGCTGTATTTTAAA
ATGTAAACTGTGCTTAAATAAAACCAGTAACTTTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6494011 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6494011 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14326 same embryo
 EMAGE:14325 same embryo
 EMAGE:14323 same embryo
 EMAGE:14324 same embryo
 EurExpress:euxassay_004120 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS