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EMAGE:14466

Ndufa13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 ( MGI:1914434)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466
"Pseudo-wholemount" of euxassay_005347. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005347_01 euxassay_005347_02 euxassay_005347_03 euxassay_005347_04
EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466
euxassay_005347_05 euxassay_005347_06 euxassay_005347_07 euxassay_005347_08 euxassay_005347_09
EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466
euxassay_005347_10 euxassay_005347_11 euxassay_005347_12 euxassay_005347_13 euxassay_005347_14
EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466 EMAGE:14466
euxassay_005347_15 euxassay_005347_16 euxassay_005347_17 euxassay_005347_18 euxassay_005347_19
EMAGE:14466 EMAGE:14466 EMAGE:14466
euxassay_005347_20 euxassay_005347_21 euxassay_005347_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14466Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14466_wholemount_strong.wlz
14466_wholemount_moderate.wlz
14466_wholemount_weak.wlz
14466_wholemount_possible.wlz
14466_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14466_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8300
Entity Detected:Ndufa13, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 ( MGI:1914434)
Sequence:sense strand is shown

>T8300
CCATTGCACACTTCGATGAACTCGAAAACGTGTACGATGTGCGGGTGCCGTACTCCCCGCAGGATGGACA
GCTCTCGAGGCAGGAACTTGTTGACGAAGTCCGGAGGCGCTCGCCGGCGGTCCACCACCTTGATGGCCAC
CGTCCCTTTATACTTCTTGGAGGTGGCCACTTTCACCTTGGAGTAGCTGCCCTCACCTATCGTGCGGCCC
AGCTTATAGCCAAGTTCGCTCAGGAGTTTGTCGCCCGACATGGTGGCGCCCGGGGCGCGCGGGGAGCAGG
AGGCGGCTGCTGTCGGGGGGCGGCCGGACTCCAATCTCGGGCCTAACCCATGGTGCTTGGCACCTGCACC
CCCGTGCCCCCATGTGCCCACTCCCAAGGCCCTACAGCCGCGATGACTTTTATTGCCCGGGTAACAATTT
CTGCCTTGTGAAGTGACTGCGGGCGTCACTCGGCCTTGGGGCGGGGACCCTCCCTCCCCCGCCCCGCGGG
CTCCCTAAACCCTTCTTAGGCTTTGTGACTCAATCGCCCTTAATGGTCAGTTCCTCGTGAGAAGTCACTG
GCGAGGAGACTGCCCACTGATGTGGAACAGGACAAGTCCCTCCCTGAAGTGATGGTGCTCAGGTGGGTGG
GAACCAGCCTGTTGCCTCGAGCCTGGCTACCATGGCTCACGAAAGAAAGGAACCTCCTGGGTGACGGAAC
TTCCGCCACACTCAAAATGGTGGTCGCGCGTTGCCTCACTTCCGCTGGTGGCCGGAAGTTGCGGGTCCTG
CAAGTATGGCGGCGTCGAAGGTGAAGCAGGACATGCCCCCGCCAGGGGGCTACGGCCCCATCGACTACAA
GCGGAACCTGCCCCGCCGGGGACTGTCGGGGTACAGCATGTTTGCTGTGGGCATCGGGGCCTTGATCTTT
GGCTACTGGAGAATGATGAGGTGGAACCAGGAGCGCAGGCGCCTGCTGATTGAGGACTTGGAGGCCAGGA
TCGCCCTCATGCCGCTCTTCCAGGCAGAGAAGGACCGGAGGACCCTGCAGATTCTCCGGGAAAACCTGGA
GGAGGAAGCCATCATCATGAAGGATGTGCCCAACTGGAAGGTGGGCGAGTCTGTGTTCCATACCACACGA
TGGGTGCCACCCCTCATTGGCGAGATGTATGGGTTGCGCACCAAGGAGGAGATGAGCAATGCCAACTTCG
GCTTCACCTGGTACACTTAGGGCCTGAGCCAACGCACATAATAAAGAGTGGTCAAATAAAAAAAAAAAAA
AAAAAA
Notes:The probe template was PCR amplified from IMAGE:1447015 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:1447015 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14470 same embryo
 EMAGE:14467 same embryo
 EMAGE:14468 same embryo
 EMAGE:14465 same embryo
 EMAGE:14469 same embryo
 EurExpress:euxassay_005347 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS